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Bump bigdataviewer-core 10.6.1 -> 10.6.3

Open tpietzsch opened this issue 1 year ago • 2 comments

tpietzsch avatar Jan 21 '25 15:01 tpietzsch

The specific failures are:

Error:  Failures: 
Error:    HDF5SaverTest.testPartitionedWriting:73
Error:    HDF5SaverTest.testPartitionedWriting2:86
Error:    HDF5SaverTest.testSave2d:62
Error:    HDF5SaverTest.testSave4d:53

They can be reproduced by the following steps:

  1. Clone labkit-ui
  2. Check out tag labkit-ui-0.4.0
  3. Edit the pom.xml, changing the parent pom-scijava version to 40.0.0, and removing all the overridden version property values from the <properties> section.
  4. Run the build using mvn -Dbigdataviewer-core.version=10.6.3 clean test.

Whereas step 4 without the new bigdataviewer-core version (mvn clean test) does not exhibit these four test failures.

I tested also the current master branch (juglab/labkit-ui@01a5c8058459a0d1a2eedc10f7212f64e021f893) with the same POM edits as above, and mvn -Dbigdataviewer-core.version=10.6.3 clean test has the same test failures there, whereas mvn clean test succeeds on my system.

ctrueden avatar Jan 22 '25 05:01 ctrueden

thank you for the guidance @ctrueden! I'll investigate ...

tpietzsch avatar Jan 23 '25 14:01 tpietzsch

I finally started looking into this. It comes down to a bug in PrimitiveBlocks in imglib core. So no need to touch labkit-ui or bigdataviewer-core. I'll fix imglib core asap

tpietzsch avatar Apr 19 '25 18:04 tpietzsch

should be fixed with imglib2-7.1.5

tpietzsch avatar Apr 21 '25 09:04 tpietzsch

Resolved by c78aff051f191f5565b6f70e3e156da983e3cfeb.

ctrueden avatar Jun 22 '25 12:06 ctrueden