r-lib
Can't install gert
** testing if installed package can be loaded from temporary location Error: package or namespace load failed for ‘gert’ in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/data1/luxinbang/software/R/lib64/R/library/00LOCK-gert/00new/gert/libs/gert.so': /lib64/libgit2.so.26: undefined symbol: libssh2_userauth_publickey_frommemory Error: loading failed Execution halted ERROR: loading failed
i try to use this command to update the binutils,but it doesn't work.. sudo yum install binutils
sudo yum install binutils
R
>Sys.setenv( USE_SYSTEM_LIBGIT2 = 1 )
------------------ Original ------------------ From: @.>; Date: 2022年3月2日(星期三) 下午4:32 To: @.>; Cc: "Jinhui @.>; @.>; Subject: Re: [r-lib/gert] Can't install gert (#144)
l am also trapped with this problem, do you know how to deal with it
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i tyr this "sudo yum install binutils" ,but it tell me that "There are no enabled repos."
font{
line-height: 1.6;
}
ul,ol{
padding-left: 20px;
list-style-position: inside;
}
This is the paper about how to install it.
```
https://jingyan.baidu.com/article/2a1383286e66c5464b134f3b.html ```
***@***.***
On 3/2/2022 ***@***.***> wrote：
i tyr this "sudo yum install binutils" ,but it tell me that "There are no enabled repos."
—Reply to this email directly, view it on GitHub, or unsubscribe.Triage notifications on the go with GitHub Mobile for iOS or Android. You are receiving this because you commented.Message ID: @.***>
font{
line-height: 1.6;
}
ul,ol{
padding-left: 20px;
list-style-position: inside;
}
May be you can use the command " conda install binutils "
***@***.***
On 3/2/2022 ***@***.***> wrote：
font{
line-height: 1.6;
}
ul,ol{
padding-left: 20px;
list-style-position: inside;
}
This is the paper about how to install it.
```
https://jingyan.baidu.com/article/2a1383286e66c5464b134f3b.html ```
***@***.***
On 3/2/2022 ***@***.***> wrote：
i tyr this "sudo yum install binutils" ,but it tell me that "There are no enabled repos."
—Reply to this email directly, view it on GitHub, or unsubscribe.Triage notifications on the go with GitHub Mobile for iOS or Android. You are receiving this because you commented.Message ID: @.***>
In particular, I am using Miniconda, ubuntu enviorment. After installing libgit2 using conda install -c conda-forge libgit2 and setSys.setenv( USE_SYSTEM_LIBGIT2 = 1 ) in R. My problem is resolved.
Hope it helps.
In particular, I am using Miniconda, ubuntu enviorment. After installing
libgit2usingconda install -c conda-forge libgit2and setSys.setenv( USE_SYSTEM_LIBGIT2 = 1 )inR. My problem is resolved.Hope it helps.
in Linux window : conda install -c conda-forge libgit2
after that in R window: Sys.setenv( USE_SYSTEM_LIBGIT2 = 1 )
done this 2 steps you can install.packages("gert") successfully
When using anaconda, please use instructions from https://anaconda.org/conda-forge/r-gert
