Patrick Bryant

Delete the previous output dir and rerun. Most likely the script is trying to continue your previous failed run. We can add some error handling for this later this week...

No, you can specify the starting sequence. There is no length limit.

Hi, There are constant updates to these packages which creates conflicts. At the time of the last update - there were no conflicts. Can you please specify what packages are...

Hi, I see you are using mamba, but this is a conda env. Have you tried with conda? You can skip these dependencies otherwise - they are only for relaxing...

Hi, We will try to add a new env next week. In the meantime either remove the link to tf-nightly (regular tf is fine) or use this env which should...

Hi, Can you try to install these into a conda env: dm-haiku==0.0.11 ml-collections biopython==1.81 chex==0.1.5 dm-tree==0.1.8 immutabledict==2.0.0 scipy tensorflow numpy==1.26.4 jaxlib==0.4.35 pandas and then: pip install --upgrade "jax[cuda12_pip]" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html