EvoBind
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patrickbryant1
In silico directed evolution of peptide binders with AlphaFold
I keep getting an error related to installing common packages. I see the warning in the dependencies instructions, but it seems that even if I press cancel and wait for...
What is the input of dimer protein should be, or it doesn't support dimer or multimer protein
Hi Patrick, I have a couple of additional questions. 1. How is the change of amino acid at each loop is defined? My understanding is that it is completely random....
dear sir, I run your colab code but i was given the errors like below at install dependency step.i also ran your colab code one week ago and at that...
Hi Patrick, Thank you for developing and sharing EvoBind，I encountered an issue where I provided the --receptor_if_residues=$RECEPTORIFRES argument with RECEPTORIFRES="73,74,76,78", but the designed peptide ended up far from these positions....
Hello, I would like to know if I need to target another protein, Should I supplement the new MSA for it? Which tools are suitable for MSA? thank you for...
Patrick, thank you very much for your software. I was testing the installation and it run successfully. Because I can't find any info about the using of the peptide_sequence option,...
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In silico directed evolution of peptide binders with AlphaFold