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Add a DataTranslator for NeuronConnect.xls data

Open mwatts15 opened this issue 7 years ago • 3 comments

Write a translator for NeuronConnect.xls and to the PyOpenWorm.data_trans package.

See other DataTranslator types in PyOpenWorm.data_trans.

The translator should read the XLS file, generate PyOpenWorm.connection.Connection objects, and produce a DataWithEvidenceDataSource.

derived from #25

mwatts15 avatar May 29 '18 01:05 mwatts15

@mwatts15 There is still desire from the community to use the original NeuronConnect.xls data set because of differing perspectives on the methodologies used to assemble them.

So I would say that data is not redundant.

Relatedly, it may be helpful to be able to select which dataset to use as a switch between multiple choices.

slarson avatar Jun 01 '18 15:06 slarson

@slarson thank you for the attention to this issue. I tried to capture that the data may not be redundant in the issue summary.

mwatts15 avatar Jun 01 '18 23:06 mwatts15

@mwatts15 @slarson Can someone elaborate on the start position for this, and then functional end goals? I've found the PyOpenWorm repository, and see both files.

BioComSoftware avatar Sep 16 '18 09:09 BioComSoftware