Neil Horner

Hi, When using bpipe on aws-batch I'm getting the following error ` java.lang.reflect.InvocationTargetException at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at org.codehaus.groovy.tools.GroovyStarter.rootLoader(GroovyStarter.java:110) at org.codehaus.groovy.tools.GroovyStarter.main(GroovyStarter.java:128) Caused by: java.lang.ExceptionInInitializerError at...

Error when running on osx-arm64

1

Hi, I get an error running bpipe on an M1 Mac. bpipe version: 0.9.11 installed either manually or from bioconda Is it possible to run bpipe on osx-arm64 architecture? Thanks...

Hi, Using JAFFA v2.2. I run JAFFAL and get a several fusion transcripts reported as expected. In order to test what happens if no fusion transcripts are identified, I removed...

Running JAFFA on osx-arm64

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Hi, I'm currently using JAFFAL on Linux with no issues. It's not working for me on Mac with an M1 chip. It looks an issue with bpipe, and I have...