repeatcraftp

repeatcraftp copied to clipboard

Hi, While testing different thresholds in the mapfile I found that shortTEs are still used for merging (https://github.com/pellescholten/repeatcraftp/tree/master/shortTE_test) Based on the following text in the readme file I assumed that...

pellescholten

In rcstat if rowRaw.get(col[2]): IndexError: list index out of range

5

Hi, I've been running repeatcraft successfully, but this error keeps flagging in some runs: ``` File "/repeatCraft/repeatcraft.py", line 187, in rcStatm.rcstat(rclabelp=outputnamelabel,rmergep=outputnamemerge,outfile= statfname, ltrgroup = True) File "/repeatCraft/helper/rcStatm.py", line 54, in...

TobyBaril

ValueError: too many values to unpack (expected 3)

1

Hello, I am getting this error while running RepeatCraft with the output obtained from RepeatMasker 4.0.9: ``` Step 1: Reformating GFF... Parsing LTR_FINDER GFF... Step 2: Labelling short TEs... Missing...

Giacomoggioli