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--postbinning_input to include only bins (no unassembled contigs)

Open patriciatran opened this issue 2 years ago • 0 comments

Description of feature

Following up on my Slack message (10/16/2023) and as per @jfy133 to post a feature request:

"It is possible to only annotate the refined or binned mags, and not the unbinned scaffolds, without skipping the Prokka annotation step altogether? I’ve been using the --postbinning_input refined_bins_only but it looks from the docu that either option also annotates the unbinned scaffolds. The unbinned scaffold annotation tends to take a really long time for me/and lots of disk space for some reason."

I am using v.2.5.0 Thank you! :)

patriciatran avatar Oct 16 '23 18:10 patriciatran