nextclade_data

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Test data for https://github.com/nextstrain/nextclade/pull/1455 DO NOT MERGE

ivan-aksamentov

corneliusroemer

Add CCHFV to nextclade_data.

3

Using the https://github.com/neherlab/CCHFV repository and NCBI Virus I was able to create nextclade_data sets for CCHFV which can then be used by `nextclade run`. Auspice trees for the three segments...

anna-parker

For testing of https://github.com/nextstrain/nextclade/pull/1454 DO NOT MERGE

ivan-aksamentov

corneliusroemer

docs: add tree to file list

1

Minor edit to the pathogen.json file so that Nextclade Web can find the "tree.json" file. The Nextclade CLI call still works as expected. Since the final augur tree might not...

j23414

- **Ebola Zaire first attempt** - **fix(#183): create data_temp if not present**

corneliusroemer

Rather than using a timestamp in changelog headings, e.g. `2024-02-16T04:00:32Z`, let's use version tag, which is a safe representation of a timestamp, e.g. `2024-02-16--04-00-32Z`. Side-by-side for comparison: ``` 2024-02-16T04:00:32Z 2024-02-16--04-00-32Z...

ivan-aksamentov

Test via: https://nextclade-git-cds-error-nextstrain.vercel.app/?dataset-server=gh:@scratch@&dataset-name=nextstrain/scratch/reference-only

corneliusroemer

ivan-aksamentov