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nextstrain
The Nextstrain command-line interface (CLI)—a program called nextstrain—which aims to provide a consistent way to run and visualize pathogen builds and access Nextstrain components like Augur and Ausp...
``` $ nextstrain update conda Checking for newer versions of Nextstrain CLI… A new version of nextstrain-cli, 10.2.0, is available! You're running 9.0.0. See what's new in the changelog: https://github.com/nextstrain/cli/blob/10.2.0/CHANGES.md#readme...
## Description of proposed changes Newer versions since 2.0.0 include fix for installing nextstrain/conda-base when the dependencies specify `x86_64-microarch-level`. ## Related issue(s) Resolves Related to ## Checklist - [ ]...
This was brought up by a user at office hours. Here is the relevant output after running `nextstrain view` (computer-specific details cropped out):  There is an error in the...
### Context _Full context in https://github.com/nextstrain/conda-base/issues/105_ Summary: If nextstrain/conda-base includes package that specifies `x86_64-microarch-level`, then installation will fail due to bug in mamba, which has been resolved in [v1.5.10](https://github.com/mamba-org/mamba/blob/1.x/CHANGELOG.md#20240920) and...
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The Nextstrain command-line interface (CLI)—a program called nextstrain—which aims to provide a consistent way to run and visualize pathogen builds and access Nextstrain components like Augur and Ausp...