solved: augustus libgsl.so.25

[Aciole-David]

If anyone else going through this lately

#augustus error after installing with conda/mamba:

$ mamba create -n funannotate funannotate

$ conda install -c bioconda augustus

$ funannotate check --show-versions

(...) Checking external dependencies... PASA: 2.4.1
CodingQuarry: 2.0
Trinity: 2.8.5
augustus: augustus: symbol lookup error: /home/fabiano.menegidio/.miniconda3/envs/funa/bin/../lib/libgsl.so.25: undefined symbol: cblas_ctrmv b

(...)

#Then:

$ augustus

augustus: error while loading shared libraries: libgsl.so.25: cannot open shared object file: No such file or directory

#solved instaling gsl: $ conda install -c conda-forge gsl

[hyphaltip]

Usually if you add conda-forge channel when installing Augustus in first place it gets it added?

[hyphaltip]

Would be good to add this issue as an alert to @bioconda recipe for augustus too?

[Aciole-David]

Usually if you add conda-forge channel when installing Augustus in first place it gets it added?

I don't know but I can test it and report