adapt algorithms and preprocessing/features

[bvarjavand]

Scripts in the above folders are built on top of utils, so when utils changed some broke. This is mainly fixing imports and modifying parameter inputs.

[jovo]

tell them where the problems are, etc.

[bvarjavand]

we want to modify lines like these https://github.com/neurodata/brainlit/blob/develop/brainlit/preprocessing/features/base.py#L96

note how it uses a segments_url kwarg instead of the correct url_segments kwarg.

We want to update methods in the following files

• [ ] https://github.com/neurodata/brainlit/blob/develop/brainlit/preprocessing/features/base.py
• [ ] https://github.com/neurodata/brainlit/blob/develop/brainlit/preprocessing/features/linear_features.py
• [ ] https://github.com/neurodata/brainlit/blob/develop/brainlit/preprocessing/features/neigborhood.py
• [ ] https://github.com/neurodata/brainlit/blob/develop/brainlit/algorithms/generate_fragments/adaptive_thresh.py