Alper Kucukural
Alper Kucukural
Could you remove "-" in the sample names in your count file and try?
These are duplicated genes in this data table. So the gene names has to be unique in a count table. Otherwise, it cannot load the table. 5502 LIMS3 16 117...
I checked your files. They are all good. You shouldn't get any error. Which DEBrowser version are you using? You can also try https://debrowser.umassmed.edu as well to test. The latest...
I got it. If you want to use your meta data in the condition selection, you cannot define more than two conditions in a column, since you compare 2 conditions....
I improved error reporting while choosing the conditions from metadata. If there are more than 2 conditions, it warns about it.
Is this something you are looking for? You can change the naming yourself, since those values are normalized log10, we gave this option to the user that they can give...
You might need to define like below. R doesn't like "/" sample | day | time | treatment | date | group_time | group_treat | batch -- | -- |...
Could you send me a sample dataset that I can recreate the problem?
Your sample names in the count_data and meta data file doesn't match. In count_data you have A_1, A_2... with underscore. In meta data file A-1, A-2,... with dash. If you...
We will work on better error reporting while uploading the data. We are reading the data with a straight forward way by making the first column to row names and...