Extremely small output after dorado correct too

[yplee614]

I ran Dorado with the command: dorado correct -m herro-v1 filter.fq > corrected.fasta 2> log The log file shows: [2024-08-01 20:37:12.161] [info] Running: "correct" "-m" "herro-v1" "filter.fq" [2024-08-01 20:41:26.694] [info] > starting correction [2024-08-01 20:44:25.782] [info] > Corrected reads written: 16583 [2024-08-01 20:44:25.782] [info] > finished correction

The input file filter.fq is filtered by a minimum length of 10kb, and has a total size of 22GB. The output corrected.fasta file contains only 585MB of corrected reads.

Run environment:

• Dorado version: 0.7.2+9ac85c6
• Dorado command: dorado correct -m herro-v1 filter.fq > corrected.fasta 2> log
• Operating system: Ubuntu 24.04
• Hardware (CPUs, Memory, GPUs): AMD 9654, 512Gb, NVIDIA 4070 super