studyGroupLessons
studyGroupLessons copied to clipboard
mozillascience
One-hour introductory lessons on ideas and tools in coding and data wrangling for research.
**Link**: http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1000424 **Author**: William Stafford Noble **Video**: N/A **Description**: A practical discussion of how to organize a bioinformatics project.
**Link**: https://peerj.com/articles/175/ **Author**: Piwowar & Vision **Video**: N/A **Description**: A study of the results of publishing open data in genomics, focusing on pattern of data reuse.
Link: https://github.com/rougier/numpy-100 Author: @rougier Video: none Description: A set of 100 numpy exerises from easy to advanced.
Link: https://github.com/rougier/matplotlib-tutorial Author: @rougier Video: none Description: This lesson introduces main matplotlib concepts, show how to go from a default setting to a better one and includes exercises.
**Link:** https://github.com/UofTCoders/studyGroup/tree/gh-pages/lessons/git2 **Author:** @QuLogic **Description:** Intermediate lesson on version control and collaboration with Git - viewing history, branching, and collaborating with others.
**Link**: https://github.com/kchriste2006/Perl_Lesson **Author**: @kchriste2006 **Video**: https://www.youtube.com/watch?v=SrfkdwrMUzE **Description**: An introduction to perl.
**Link**: https://github.com/UofTCoders/studyGroup/blob/gh-pages/lessons/Biopython/lesson.md **Author**: @mbonsma **Video**: none **Description**: Biopython is a package designed for working with genetic sequence data in Python.
**Link**: https://github.com/theavanrossum/debuggerRMarkdownLesson/blob/master/notes.md **Author**: @theavanrossum **Video**: https://www.youtube.com/watch?v=lZ7RRNQkIo8&list=PLyfPqolZyFtyE8zx2Dbm4uqZYQIeL9D9Z&index=5 **Description**: Introduction to the debugging tools built into RStudio.
**Link**: https://github.com/ttimbers/studyGroup/blob/gh-pages/lessons/2015-07-28_shell/2015-07-28_Int_Shell_lesson.md **Author**: @ttimbers **Video**: https://www.youtube.com/watch?v=t9gDTL4XWVs&list=PLyfPqolZyFtyE8zx2Dbm4uqZYQIeL9D9Z&index=2 **Description**: Data wrangling in the shell.
**Link**: https://github.com/kazi11/biomaRt_tutorial **Author**: @kazi11 **Video**: https://www.youtube.com/watch?v=hvBTWM0yPY0&list=PLyfPqolZyFtyE8zx2Dbm4uqZYQIeL9D9Z&index=4 **Description**: Using biomaRt to connect to databases like Ensembl
Metadata
Owner
Metadata
One-hour introductory lessons on ideas and tools in coding and data wrangling for research.