RSoptSC

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Thank you so much for developing the tool! I would like to know if in the LR-TF database you collected, are all LR's effects on TF activated? Is it possible...

qijt123

Great work! I am wondering how easily it is to add an spatial constraint in your tool when calculating cell cell interaction probabilities? Thanks! Yunguan

yunguan-wang

HI Mkarikom, I wonder whether RsoptSC can applied on Seurat object?

GouQiao

can not upload 10x reads. The 10x format gives three documents to upload: 'barcodes.tsv', 'genes.tsv', and 'matrix.mtx'. I can not upload these files without error messages. I have been using...

MarMas23

Hi, Thanks for the wonderful tool. I may ask how to get the full ligand-receptor list? Best, Amare

adesalegn

clusters

cdkodira1

Error with GetSignalingPartners

1

Hello!! When I try running the GetSignalingParnters using the ligand/receptor provided by the tool I get the following error: Error in makePSOCKcluster(names = spec, ...) : Cluster setup failed. 1...

alevigi

error message when installing soptSC

1

Hi, I'm using R4.0.4, and when installing soptSC, I got the following message: Error: Failed to install 'RSoptSC' from GitHub: Failed to install 'NMF' from GitHub: (converted from warning) installation...

jimmykhu