PyStasm
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mjszczep
Install on Ubuntu 12.04(VirtualBox)
Here is my try to install Pystasm on Ubuntu 12.04
lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description: Ubuntu 12.04.5 LTS
Release: 12.04
Codename: precise
gcc --version
gcc (Ubuntu 4.8.1-2ubuntu1~12.04) 4.8.1
sudo pip install PyStasm
Downloading/unpacking PyStasm
Downloading PyStasm-0.3.1.tar.gz (687kB): 687kB downloaded
Running setup.py egg_info for package PyStasm
Requirement already satisfied (use --upgrade to upgrade): numpy>=1.7 in /usr/local/lib/python2.7/dist-packages (from PyStasm)
Installing collected packages: PyStasm
Running setup.py install for PyStasm
building 'stasm._stasm' extension
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/landmarks.cpp -o build/temp.linux-x86_64-2.7/src/landmarks.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/hatdesc.cpp -o build/temp.linux-x86_64-2.7/src/hatdesc.o
src/hatdesc.cpp:63:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical // prevent OpenMP concurrent access to cache_g
^
src/hatdesc.cpp:76:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical // prevent OpenMP concurrent access to cache_g
^
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/shapehacks.cpp -o build/temp.linux-x86_64-2.7/src/shapehacks.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/eyedet.cpp -o build/temp.linux-x86_64-2.7/src/eyedet.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/stasm.cpp -o build/temp.linux-x86_64-2.7/src/stasm.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/convshape.cpp -o build/temp.linux-x86_64-2.7/src/convshape.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/err.cpp -o build/temp.linux-x86_64-2.7/src/err.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/hat.cpp -o build/temp.linux-x86_64-2.7/src/hat.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/shapemod.cpp -o build/temp.linux-x86_64-2.7/src/shapemod.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/py_wrapper.cpp -o build/temp.linux-x86_64-2.7/src/py_wrapper.o
src/py_wrapper.cpp: In function ‘PyObject* landmarks_to_PyArray(float*, int)’:
src/py_wrapper.cpp:39:48: error: ‘NPY_ARRAY_OWNDATA’ was not declared in this scope
PyArray_ENABLEFLAGS((PyArrayObject*)retArray, NPY_ARRAY_OWNDATA);
^
src/py_wrapper.cpp:39:65: error: ‘PyArray_ENABLEFLAGS’ was not declared in this scope
PyArray_ENABLEFLAGS((PyArrayObject*)retArray, NPY_ARRAY_OWNDATA);
^
In file included from /usr/include/python2.7/numpy/arrayobject.h:14:0,
from src/py_wrapper.cpp:12:
src/py_wrapper.cpp: In function ‘const char* PyArray_to_image(PyObject*, int*, int*)’:
src/py_wrapper.cpp:60:42: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
PyArray_FROM_OTF(array_obj, NPY_UINT8, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
src/py_wrapper.cpp: In function ‘PyObject* Py_search_pinned(PyObject*, PyObject*)’:
src/py_wrapper.cpp:299:32: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
pinned_obj, NPY_FLOAT, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
src/py_wrapper.cpp: In function ‘PyObject* Py_force_points_into_image(PyObject*, PyObject*)’:
src/py_wrapper.cpp:360:46: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
PyArray_FROM_OTF(landmarks_obj, NPY_FLOAT, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
src/py_wrapper.cpp: In function ‘PyObject* Py_convert_shape(PyObject*, PyObject*)’:
src/py_wrapper.cpp:418:47: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
PyArray_FROM_OTF(landmarks_obj, NPY_FLOAT, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
error: command 'gcc' failed with exit status 1
Complete output from command /usr/bin/python2.7 -c "import setuptools;__file__='/tmp/pip_build_root/PyStasm/setup.py';exec(compile(open(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-a8Sxcs-record/install-record.txt --single-version-externally-managed:
running install
running build
running build_py
creating build
creating build/lib.linux-x86_64-2.7
creating build/lib.linux-x86_64-2.7/stasm
copying stasm/__init__.py -> build/lib.linux-x86_64-2.7/stasm
running egg_info
writing requirements to PyStasm.egg-info/requires.txt
writing PyStasm.egg-info/PKG-INFO
writing top-level names to PyStasm.egg-info/top_level.txt
writing dependency_links to PyStasm.egg-info/dependency_links.txt
warning: manifest_maker: standard file '-c' not found
reading manifest file 'PyStasm.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'PyStasm.egg-info/SOURCES.txt'
creating build/lib.linux-x86_64-2.7/stasm/data
copying stasm/data/README.txt -> build/lib.linux-x86_64-2.7/stasm/data
copying stasm/data/haarcascade_frontalface_alt2.xml -> build/lib.linux-x86_64-2.7/stasm/data
copying stasm/data/haarcascade_mcs_lefteye.xml -> build/lib.linux-x86_64-2.7/stasm/data
copying stasm/data/haarcascade_mcs_righteye.xml -> build/lib.linux-x86_64-2.7/stasm/data
copying stasm/data/testface.jpg -> build/lib.linux-x86_64-2.7/stasm/data
running build_ext
building 'stasm._stasm' extension
creating build/temp.linux-x86_64-2.7
creating build/temp.linux-x86_64-2.7/src
creating build/temp.linux-x86_64-2.7/src/MOD_1
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/landmarks.cpp -o build/temp.linux-x86_64-2.7/src/landmarks.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/hatdesc.cpp -o build/temp.linux-x86_64-2.7/src/hatdesc.o
src/hatdesc.cpp:63:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical // prevent OpenMP concurrent access to cache_g
^
src/hatdesc.cpp:76:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
#pragma omp critical // prevent OpenMP concurrent access to cache_g
^
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/shapehacks.cpp -o build/temp.linux-x86_64-2.7/src/shapehacks.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/eyedet.cpp -o build/temp.linux-x86_64-2.7/src/eyedet.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/stasm.cpp -o build/temp.linux-x86_64-2.7/src/stasm.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/convshape.cpp -o build/temp.linux-x86_64-2.7/src/convshape.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/err.cpp -o build/temp.linux-x86_64-2.7/src/err.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/hat.cpp -o build/temp.linux-x86_64-2.7/src/hat.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/shapemod.cpp -o build/temp.linux-x86_64-2.7/src/shapemod.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -fPIC -I/usr/include/python2.7 -I/usr/local/lib/python2.7/dist-packages/numpy/core/include -c src/py_wrapper.cpp -o build/temp.linux-x86_64-2.7/src/py_wrapper.o
src/py_wrapper.cpp: In function ‘PyObject* landmarks_to_PyArray(float*, int)’:
src/py_wrapper.cpp:39:48: error: ‘NPY_ARRAY_OWNDATA’ was not declared in this scope
PyArray_ENABLEFLAGS((PyArrayObject*)retArray, NPY_ARRAY_OWNDATA);
^
src/py_wrapper.cpp:39:65: error: ‘PyArray_ENABLEFLAGS’ was not declared in this scope
PyArray_ENABLEFLAGS((PyArrayObject*)retArray, NPY_ARRAY_OWNDATA);
^
In file included from /usr/include/python2.7/numpy/arrayobject.h:14:0,
from src/py_wrapper.cpp:12:
src/py_wrapper.cpp: In function ‘const char* PyArray_to_image(PyObject*, int*, int*)’:
src/py_wrapper.cpp:60:42: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
PyArray_FROM_OTF(array_obj, NPY_UINT8, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
src/py_wrapper.cpp: In function ‘PyObject* Py_search_pinned(PyObject*, PyObject*)’:
src/py_wrapper.cpp:299:32: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
pinned_obj, NPY_FLOAT, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
src/py_wrapper.cpp: In function ‘PyObject* Py_force_points_into_image(PyObject*, PyObject*)’:
src/py_wrapper.cpp:360:46: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
PyArray_FROM_OTF(landmarks_obj, NPY_FLOAT, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
src/py_wrapper.cpp: In function ‘PyObject* Py_convert_shape(PyObject*, PyObject*)’:
src/py_wrapper.cpp:418:47: error: ‘NPY_ARRAY_IN_ARRAY’ was not declared in this scope
PyArray_FROM_OTF(landmarks_obj, NPY_FLOAT, NPY_ARRAY_IN_ARRAY);
^
/usr/include/python2.7/numpy/ndarrayobject.h:93:28: note: in definition of macro ‘PyArray_FROM_OTF’
(((flags) & NPY_ENSURECOPY) ? \
^
error: command 'gcc' failed with exit status 1
----------------------------------------
Cleaning up...
Command /usr/bin/python2.7 -c "import setuptools;__file__='/tmp/pip_build_root/PyStasm/setup.py';exec(compile(open(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-a8Sxcs-record/install-record.txt --single-version-externally-managed failed with error code 1 in /tmp/pip_build_root/PyStasm
Traceback (most recent call last):
File "/usr/local/bin/pip", line 9, in <module>
load_entry_point('pip==1.4.1', 'console_scripts', 'pip')()
File "/usr/local/lib/python2.7/dist-packages/pip-1.4.1-py2.7.egg/pip/__init__.py", line 148, in main
return command.main(args[1:], options)
File "/usr/local/lib/python2.7/dist-packages/pip-1.4.1-py2.7.egg/pip/basecommand.py", line 169, in main
text = '\n'.join(complete_log)
UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 36: ordinal not in range(128)
Based on the compiler error, it looks like the numpy include headers it's using are older than 1.7. I know pip said it's up to date, but you can test to see if the macros it's missing are there using $ grep NPY_ARRAY_OWNDATA /usr/local/lib/python2.7/dist-packages/numpy/core/include/*.h. If it turns up empty, try updating numpy yourself.
