Potential bug when trying to run BNG model

[FAnderl]

I am having difficulties running an imported BNG model.

Two things I noticed:

• So apparently CellBlender parses the imported BNG model and creates its own *.bngl file in .../BNGL_import_test_files. This internal BNG model is then used for CellBlender simulations and further parsing (not entirely sure what's going on under the hood).

• Every kinetic rate parameter in an BNG model that is NOT defined explicitely but instead in a way like

  begin parameters
  k 0.01
  end parameters
  (...)
  begin reaction rules
  A() + B() -> C()  k*10
  end reaction rules
  

  gets redefined in the internal BNG model as

  begin parameters
  k 0.01
  und_rateLaw1  k*0.1
  end parameters
  (...)
  begin reaction rules
  A() + B() -> C()  _rateLaw1
  end reaction rules
  

However, notice that while in the parameters block the parameter is redefined explicitely as und_rateLaw1, the reaction rule uses _rateLaw1, which is naturally undefined.

I suspect this is unwanted behaviour and leads to errors further down the line.