Simulated experiments for paper, result files

[lutteropp]

Still coming:

• all_brlen_linkage_results
• all_standard_random_results
• all_standard_multi_results
• (... likely some more)

all_prob_results.csv all_scaler_results.csv all_unpartitioned_results.csv all_standard_results.csv

[lutteropp]

all_standard_random_results.csv

[lutteropp]

multirun_results.csv

[lutteropp]

scramble_partitions_results.csv

[lutteropp]

t_30_r_3_partition_size_results.csv

[lutteropp]

These all are old and already deprecated. Here are the new ones. Experiments A,B,C were run on a single haswell node each, experiments D,E on the PhD laptop.

C_20_1_results.csv B_20_1_results.csv A_norandom_40_4_results.csv A_norandom_40_3_results.csv A_norandom_40_2_results.csv A_norandom_40_1_results.csv A_30_3_results.csv A_20_2_results.csv A_10_1_results.csv E_psize_results.csv D_scramble_results.csv

[lutteropp]

Here we go. Experiments A,B,C,D on a single haswell node each; experiments D,E on the PhD laptop. This time with also reporting AIC and AICc scores. These are the ones to use for the paper.

A_10_1_results.csv A_20_2_results.csv A_30_3_results.csv A_norandom_40_1_results.csv A_norandom_40_2_results.csv A_norandom_40_3_results.csv A_norandom_40_4_results.csv B_20_1_results.csv C_20_1_results.csv D_scramble_results.csv E_psize_results.csv

[lutteropp]

I had to redo experiment D, here is the new result file D_scramble_results.csv

[lutteropp]

Result file for experiment F, including number of MSA patterns F_mpi_results.csv

[lutteropp]

Results for the second experiment F, with more MSA patterns and more MPI processes F_mpi_results2.csv