Peptide of length < 30 exceeding max length of 30

[yangkl96]

Hello,

Some of my input peptides which are shorter than length 30 were ignored during prediction. For example, KPIQRTILM(O)M(O)GRYVEPIEDVPCGNI was ignored because the M(O) was interpreted as 4 instead of 1 amino acids long.

I did a quick fix by replacing line 200 in predfull.py with the following, but there is probably a cleaner way to do this pep_len = 0 for char in item.Peptide: if char in Alist: pep_len += 1 #if len(item.Peptide) > max_len: if pep_len > max_len:

Thank you for this great tool, Kevin