sttkit

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Currently always return PDF, but optionally PNG. Change to specify it directly, with default of PNG because PDFs get huge with HD. --image_format=pdf:png

lima1

lima1

Single cell deconvolution still not working. New probe filtering causes issues with v5.

lima1

Currently it's added in the meta columns, which is messy.

lima1

lima1

Probably beneficial to annotate all 4 samples from a chip where it makes sense. Especially for smaller samples.

lima1

Especially move some code to the sttkit library

lima1

Subscript out of bounds error during spatial integration in st_cluster.R

1

Thank you for making such a great tool! I encountered an error while running st_cluster.R from the STTKIT package. The script terminates with a subscript out-of-bounds error during the spatial...

leap-ahead225

lima1