LAYNII
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layerfMRI
Stand alone fMRI software suite for layer-fMRI analyses.
Hi there, I want to report that during "layerificaiton" with `LN2_LAYERS` I had a problem with too much RAM used with the consequence of the system killing the running process....
I have made a video on using the Freesurfer volume segmentations in LayNii: https://www.youtube.com/watch?v=y5MqN0jGIBU However, there seems to be interest to using the triangular mesh surfaces rather than the volume...
Hi experts, Recently, I used LN_BOCO to do BOLD correction. Basically, I have a BOLD.nii with 360 volumes and a Nulled.nii with 360 volumes. Then, I used the following command...
Hi there, I am currently attempting to do within-layer smoothing using LN_LAYER_SMOOTH with the NoKissing flag (LayNii v2.5.2 for M1/M2 mac). However when I run the below code with [these...
I need to have a detailed look into this issue. E.g. if someone has patches of clusters within the multilaterate disk, the zeros get voronoi filled in. Workaround for this...
I decided to separate magnitude and phase image processing programs because the interface gets too clunky when the same program tries to handle both types of images. # Magnitude type...
I find divergence operator (Laplacian of a vector field) useful when analyzing images. - [x] Implement divergence - [ ] Implement circular variant that can be used with phase images...
It would be very handy to have minimum, maximum, and median, intensity projection over a selected number of slices and axes to e.g. highlight the veins in T2*w images.
Hi all, I've went through some of your tutorial articles and videos, but still don't know how to get the rim.nii as an input file to `LN2_LAYERS`. I saw that...
As proposed by https://doi.org/10.1093/cercor/bhad151 , it might be handy for users to be able to compute voxel wise sensitity and specificity maps. We can take 4D nifti files as input,...