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What structure matcher algorithm is used for the challenge set?

Open YKQ98 opened this issue 1 year ago • 1 comments

Hi, thank you for this amazing work! Just curious, what structure matcher algorithm is used for the challenge set?

YKQ98 avatar May 13 '24 23:05 YKQ98

Hi,

Thank you for asking this question. For the challenge set, we use the Pymatgen StructureMatcher class to establish if two structures are a match. We use a fractional length tolerance of 0.2, a site tolerance of 0.3 Angstroms, and an angle tolerance of 5 degrees, which are the default values in Pymatgen. Both structures are reduced to primitive cells before matching, and are scaled to equivalent volume.

Regards, Luis

lantunes avatar May 15 '24 00:05 lantunes