Kristian Davidsen

>When the "reverse" combination of barcodes is detected, am I understanding correctly that you would like AdapterRemoval output the insert sequence in the "original" orientation and/or record the detected direction...

On the top four points: 1. Great 2. Great 3. Consider if it makes sense to _not_ generate the opposite barcode pair. After all the option here is `explicit` and...

Thank you so much for doing this! Adding a `--normalize-orientation` flag makes total sense and renaming to `--barcode-orientation` is also sensible. I do not have strong opinions regarding the naming...