Jakub Kaczmarzyk
Jakub Kaczmarzyk
@LukeSchlangen - I recommend deploying using the included `Dockerfile`. That file provides a standard method of installing this software, and you won't have to worry about the dependencies that @jbowens...
according to [the apptainer's community announcement](https://apptainer.org/news/community-announcement-20211130/), apptainer is the continuation of singularity. so i'd like to keep this repo as building apptainer. singularity from sylabs is a commercial product, and...
@karpathy - i'd like to help with the rewrite if possible. where is that being done? all of the branches here (except master) seem stale.
interesting, i wonder how that got in there... thanks for the report @yarikoptic . i don't have enough bandwidth to look into this now unfortunately. i will be much more...
I considered this, but the author of `pigz` (Mark Adler) says that there is limited improvement with decompression. The decompression apparently must be done in series, so it can't be...
>What about Chris Rorden's (zlib optimizations)[https://crnl.readthedocs.io/optimizing_spm_fsl/index.html] for the general performance of the container? Chris seems to get (huge uplifts)[https://github.com/neurolabusc/pigz-bench-python#readme] Thanks for sharing. Many of the use-cases are related to compression,...
@yarikoptic - yes it could be an option to prepend `eatmydata` to `apt-get install` calls. i would like to keep it optional though.
hmm `ca-certificates` is installed in the container... I also cannot reproduce the curl error. to add `--insecure` to the spm download, one can use the following: ```bash docker run --rm...
@Remi-Gau - thanks for this report. it looks like this was fixed in version 0.8.0. but there is no docker image for that version. i am creating a new issue...
@Remi-Gau - thanks, looks like 0.8.0 is not on dockerhub. @djarecka - dockerhub isn't automatically building containers for neurodocker. i don't have admin rights on the dockerhub page -- could...