tapestry

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use already mapping with minimap

1

Hello, I would like to know if it is possible to modify Tapestry to take a minimap mapping BAM as input, so as not to redo the mapping, hich would...

sravel

Read alignment plot interpretation

2

Hi! I wonder a bit on how to interpret ploidy based on the read alignment plots, for example:  Would this be a clear signal for diploid or triploid? It's...

hoelzer

[feature suggestion] add support for (canu) corrected reads

1

Hi, I love the tool so far, but I wish you could use corrected long reads as created during canu assembly for example instead of all the raw reads. Cheers

JWDebler

Adjust scale of read alignments

1

It's more a suggestion than an issue but it would be awesome if the position axis in the read alignment graph would scale with the size of the contig. That...

Niicii

KeyError: 'depth'

7

In installed Tapestry in a Conda environment on our HPC and am trying to run : ``` weave -a /path/M17.racon3.medaka.pilon.fasta -r /path/ancestor.17.nanopore.nanofilt.fastq.gz -t TTAGGG \ -o /path/pilon_rounds/tapestry_output -c 10 -l...

CaroZ655