How to use our own DEG results ın comparison analysis?

[kiwipeel]

Hi,

I think tool calculates DEGs between two condition in compatison analysis is at single cell level. I want to import my DEGs results I obtained after doing pseudobulking for each cell type . How can I do it?

[sqjin]

@kiwipeel This is definitely possible by manually modifying the CellChat object.

[ATpoint]

@kiwipeel Simple run identifyOverExpressedGenes() and then inspect how [email protected] is formatted. You can then modify that slot and populate with your custom DE results, matching that format.