Merge per replicate

[LinearParadox]

Hi all,

So I wanted to run cellchat per biological replicate. Mainly, it's because I am concerned that for some population, it can be defined as interacting even though cells may be coming from different replicates.

I want to then merge them and group by condition. Is there a way to do this?

[kiwipeel]

Hi all,

So I wanted to run cellchat per biological replicate. Mainly, it's because I am concerned that for some population, it can be defined as interacting even though cells may be coming from different replicates.

I want to then merge them and group by condition. Is there a way to do this?

Hi. Did you find a solution? I am trying to do same thing.