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Specifying multiple methods for repOverlap

Open Jdyn opened this issue 4 years ago • 2 comments

Hello, with respect to repOverlap, is there a way to specify and compute more than one overlap metric at a time? Based on the source, it looks like you can only do one at a time, but the documentation mentions doing "a combination of methods".

Jdyn avatar Feb 11 '22 16:02 Jdyn

Hi, @Jdyn! My name is Aleksandr Popov, I am a developer of the Immunarch package. Thank you for using our software!

Yes, using combinations of methods is not implemented in Immunarch, but .method parameter can accept a vector with names of methods, from which it will use the 1st method. Thank you for noticing this; we will change it in the future versions of Immunarch to make the function interface and documentation more clear.

Best regards, Aleksandr

Alexander230 avatar Feb 14 '22 12:02 Alexander230

Thank you for the response. That is unfortunate to hear, hopefully we will see much improved performance, in terms of the overall runtime, compared to running each method individually.

Jdyn avatar Feb 25 '22 18:02 Jdyn