hrbrmstr
Unable to install via dev tools
Hi In R console i try to install this package, however it does not appear to work. Currently using 3.5.2 - do i need to downgrade my R?
>devtools::install_github("hrbrmstr/msgxtract
Downloading GitHub repo hrbrmstr/msgxtractr@master
Error in process_initialize(self, private, command, args, stdin, stdout, :
Command not found
In addition: Warning messages:
1: In untar2(tarfile, files, list, exdir) :
skipping pax global extended headers
2: In untar2(tarfile, files, list, exdir) :
skipping pax global extended headers
Greetings! Thx for trying to kick the tyres of the pkg and for taking the time to file an issue.
Can you provide the output of devtools::session_info() or sessionInfo() into a code block? That'll help triage.
Hi @hrbrmstr, I had exactly the same issue as @Oneiricer. I'm using a windows machine, and here is the session Info:
- Session info --------------------------------------------------------------------------------------------------------------------------------------------------------------
setting value
version R version 3.5.2 (2018-12-20)
os Windows Server x64
system x86_64, mingw32
ui Rgui
language (EN)
collate German_Switzerland.1252
ctype German_Switzerland.1252
tz Europe/Berlin
date 2019-02-08
- Packages ------------------------------------------------------------------------------------------------------------------------------------------------------------------
package * version date lib source
assertthat 0.2.0 2017-04-11 [1] CRAN (R 3.5.2)
backports 1.1.3 2018-12-14 [1] CRAN (R 3.5.2)
callr 3.1.1 2018-12-21 [1] CRAN (R 3.5.2)
cli 1.0.1 2018-09-25 [1] CRAN (R 3.5.2)
crayon 1.3.4 2017-09-16 [1] CRAN (R 3.5.2)
curl 3.3 2019-01-10 [1] CRAN (R 3.5.2)
desc 1.2.0 2018-05-01 [1] CRAN (R 3.5.2)
devtools * 2.0.1 2018-10-26 [1] CRAN (R 3.5.2)
digest 0.6.18 2018-10-10 [1] CRAN (R 3.5.2)
fs 1.2.6 2018-08-23 [1] CRAN (R 3.5.2)
glue 1.3.0 2018-07-17 [1] CRAN (R 3.5.2)
magrittr 1.5 2014-11-22 [1] CRAN (R 3.5.2)
memoise 1.1.0 2017-04-21 [1] CRAN (R 3.5.2)
packrat 0.5.0 2018-11-14 [1] CRAN (R 3.5.2)
pkgbuild 1.0.2 2018-10-16 [1] CRAN (R 3.5.2)
pkgload 1.0.2 2018-10-29 [1] CRAN (R 3.5.2)
prettyunits 1.0.2 2015-07-13 [1] CRAN (R 3.5.2)
processx 3.2.1 2018-12-05 [1] CRAN (R 3.5.2)
ps 1.3.0 2018-12-21 [1] CRAN (R 3.5.2)
R6 2.3.0 2018-10-04 [1] CRAN (R 3.5.2)
Rcpp 1.0.0 2018-11-07 [1] CRAN (R 3.5.2)
remotes 2.0.2 2018-10-30 [1] CRAN (R 3.5.2)
rlang 0.3.1 2019-01-08 [1] CRAN (R 3.5.2)
rprojroot 1.3-2 2018-01-03 [1] CRAN (R 3.5.2)
sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 3.5.2)
usethis * 1.4.0 2018-08-14 [1] CRAN (R 3.5.2)
withr 2.1.2 2018-03-15 [1] CRAN (R 3.5.2)
By the way, it did work fine on my colleague's Mac. Thanks
thx. Lemme get 3.5.2 onto the Windows VM (the Rtools for that are definitely different) and I'll get back to you ASAP.
Similar issue on R 3.5.2 in Windows 10. I was able to install commit f1759d8 using devtools::install_github("hrbrmstr/msgxtractr", ref = 'f1759d8'), but 2dc605b and 017d6c0 both failed. I did not try 6535edc or 6769a39. Hopefully that helps you narrow down what the issue may be.
I believe this is now fixed. I was just able to install it on the same machine that failed before, although it is now using R 3.6.0 (so not exactly the same config).
(EDIT: Add session_info)
Hello @hrbrmstr -
I am also unable to install.
OS: Win10 Enterprise, 64-bit R version: 3.6.0 Devtools35
devtools::install_github("hrbrmstr/msgxtractr")
Downloading GitHub repo hrbrmstr/msgxtractr@master
/Rtools/bin/tar: Child returned status 127
/Rtools/bin/tar: Error is not recoverable: exiting now
External tar failed with --force-local, trying without
/Rtools/bin/tar: Child returned status 127
/Rtools/bin/tar: Error is not recoverable: exiting now
External tar failed with --force-local, trying without
Error: Failed to install 'msgxtractr' from GitHub:
Does not appear to be an R package (no DESCRIPTION)
In addition: Warning messages:
1: In utils::untar(tarfile, ...) : ‘tar.exe -xf "C:\Users\<USER>\AppData\Local\Temp\RtmpIXPEtg\file39641a2bbb.tar.gz" -C "C:/Users/<USER>/AppData/Local/Temp/RtmpIXPEtg/remotes396417b329d0"’ returned error code 2
2: In system(cmd, intern = TRUE) : running command 'tar.exe -tf "C:\Users\<USER>\AppData\Local\Temp\RtmpIXPEtg\file39641a2bbb.tar.gz"' had status 2
devtools::session_info()
-
Session info ------------------------------------------------------------------------------------------------------------------------------------------------------------- setting value
version R version 3.6.0 (2019-04-26) os Windows 10 x64
system x86_64, mingw32
ui RStudio
language (EN)
collate English_United States.1252
ctype English_United States.1252
tz America/Los_Angeles
date 2019-07-02 -
Packages ----------------------------------------------------------------------------------------------------------------------------------------------------------------- package * version date lib source
assertthat 0.2.1 2019-03-21 [1] CRAN (R 3.6.0) backports 1.1.4 2019-04-10 [1] CRAN (R 3.6.0) callr 3.2.0 2019-03-15 [1] CRAN (R 3.6.0) cli 1.1.0 2019-03-19 [1] CRAN (R 3.6.0) crayon 1.3.4 2017-09-16 [1] CRAN (R 3.6.0) curl 3.3 2019-01-10 [1] CRAN (R 3.6.0) desc 1.2.0 2018-05-01 [1] CRAN (R 3.6.0) devtools * 2.0.2 2019-04-08 [1] CRAN (R 3.6.0) digest 0.6.19 2019-05-20 [1] CRAN (R 3.6.0) fs 1.3.1 2019-05-06 [1] CRAN (R 3.6.0) glue 1.3.1 2019-03-12 [1] CRAN (R 3.6.0) magrittr 1.5 2014-11-22 [1] CRAN (R 3.6.0) memoise 1.1.0 2017-04-21 [1] CRAN (R 3.6.0) pkgbuild 1.0.3 2019-03-20 [1] CRAN (R 3.6.0) pkgload 1.0.2 2018-10-29 [1] CRAN (R 3.6.0) prettyunits 1.0.2 2015-07-13 [1] CRAN (R 3.6.0) processx 3.3.1 2019-05-08 [1] CRAN (R 3.6.0) ps 1.3.0 2018-12-21 [1] CRAN (R 3.6.0) R6 2.4.0 2019-02-14 [1] CRAN (R 3.6.0) Rcpp 1.0.1 2019-03-17 [1] CRAN (R 3.6.0) remotes 2.1.0 2019-06-24 [1] CRAN (R 3.6.0) rlang 0.3.4 2019-04-07 [1] CRAN (R 3.6.0) rprojroot 1.3-2 2018-01-03 [1] CRAN (R 3.6.0) rstudioapi 0.10 2019-03-19 [1] CRAN (R 3.6.0) sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 3.6.0) usethis * 1.5.0 2019-04-07 [1] CRAN (R 3.6.0) withr 2.1.2 2018-03-15 [1] CRAN (R 3.6.0)
[1] C:/Users/<USER>/Documents/R/win-library/3.6 [2] C:/Program Files/R/R-3.6.0/library
Those are not msgxtractr-related errors, those are Rtools-ish errors on Windows. Please take it up with GitHub (transmission errors?) / or R-Core/CRAN.
@hrbrmstr thanks for the quick response.
I tried installing on my Linux machine (Ubuntu 19.10; RStudio 3.6.0) and got a bit further but still failed:
devtools::install_github("hrbrmstr/msgxtractr")
Downloading GitHub repo hrbrmstr/msgxtractr@master
✔ checking for file ‘/tmp/RtmpCDwxkk/remotes2fce3d7c336c/hrbrmstr-msgxtractr-c705017/DESCRIPTION’ ...
─ preparing ‘msgxtractr’:
✔ checking DESCRIPTION meta-information ...
─ cleaning src
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ building ‘msgxtractr_0.2.1.tar.gz’
Installing package into ‘/home/USER/R/x86_64-pc-linux-gnu-library/3.6’
(as ‘lib’ is unspecified)
* installing *source* package ‘msgxtractr’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/USER/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VjHo9C/r-base-3.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/USER/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VjHo9C/r-base-3.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c alloc.c -o alloc.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/USER/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-VjHo9C/r-base-3.6.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c date.c -o date.o
In file included from date.c:33:
util.h:65:8: error: unknown type name ‘uint32_t’
extern uint32_t GETINT32(unsigned char*p);
^~~~~~~~
util.h:66:8: error: unknown type name ‘uint16_t’
extern uint16_t GETINT16(unsigned char*p);
^~~~~~~~
util.h:67:8: error: unknown type name ‘uint8_t’
extern uint8_t GETINT8(unsigned char*p);
^~~~~~~
util.h:70:8: error: unknown type name ‘uint32_t’
extern uint32_t geti32(FILE *fp);
^~~~~~~~
util.h:71:8: error: unknown type name ‘uint16_t’
extern uint16_t geti16(FILE *fp);
^~~~~~~~
util.h:72:8: error: unknown type name ‘uint8_t’
extern uint8_t geti8(FILE *fp);
^~~~~~~
make: *** [/usr/lib/R/etc/Makeconf:167: date.o] Error 1
ERROR: compilation failed for package ‘msgxtractr’
* removing ‘/home/USER/R/x86_64-pc-linux-gnu-library/3.6/msgxtractr’
Error: Failed to install 'msgxtractr' from GitHub:
(converted from warning) installation of package ‘/tmp/RtmpCDwxkk/file2fce213915a9/msgxtractr_0.2.1.tar.gz’ had non-zero exit status