Hi,
I installed on Linux exactly like how it was mentioned.
WHen I run progres embed -l filepaths.txt -o db_embeddings.pt -f guess
I get this error.
File "/home/svu/e1103389/anaconda3/envs/prog1/bin/progres", line 115, in
main()
File "/home/svu/e1103389/anaconda3/envs/prog1/bin/progres", line 108, in main
from progres import progres_embed
File "/home/svu/e1103389/anaconda3/envs/prog1/lib/python3.9/site-packages/progres/init.py", line 1, in
from .progres import *
File "/home/svu/e1103389/anaconda3/envs/prog1/lib/python3.9/site-packages/progres/progres.py", line 8, in
from torch_scatter import scatter
File "/home/svu/e1103389/anaconda3/envs/prog1/lib/python3.9/site-packages/torch_scatter/init.py", line 16, in
torch.ops.load_library(spec.origin)
File "/home/svu/e1103389/anaconda3/envs/prog1/lib/python3.9/site-packages/torch/_ops.py", line 220, in load_library
ctypes.CDLL(path)
File "/home/svu/e1103389/anaconda3/envs/prog1/lib/python3.9/ctypes/init.py", line 374, in init
self._handle = _dlopen(self._name, mode)
OSError: /oceanstor/home/e1103389/anaconda3/envs/prog1/lib/python3.9/site-packages/torch_scatter/_version_cuda.so: undefined symbol: _ZN5torch3jit17parseSchemaOrNameERKSs
Please help
Hmm, that's strange. I'm guessing a progres search run also errors?
You could try fixing pytorch-scatter v2.0.9, which works with pytorch v1.11 for me locally and on CI.
If that doesn't work, could you output the result of conda list with the prog1 environment activated?
greener-group
