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IMAS v3.42.0

Open orso82 opened this issue 1 year ago • 4 comments

This version is a bridge between the V3 and V4 IMAS data dictionary. Some fields that we've taken for granted are becoming obsolescent. Just putting it out here so people can give it a try.

IMAS-news-2024-10.pdf

orso82 avatar Nov 14 '24 04:11 orso82

@torrinba please note that the newsletter about 3.42.0 says that "Changed suffixes *_tor into *_phi to denote the toroidal component of a vector in the (R,phi,Z) right-handed cylinder coordinate system (change included in 3.42.0)".

However this is not always true (I have marked the exceptions with a * in the list below). Does somebody understand the logic with which only certain fields go from _tor to _phi?

I am very worried of people starting to mix the usage of the _tor and _phi fields...

  waves.coherent_wave[:].profiles_2d[:].ion[:].state[:].power_density_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_2d[:].ion[:].state[:].power_density_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_2d[:].ion[:].power_density_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_2d[:].ion[:].power_density_thermal_n_tor ↔ _phi
* waves.coherent_wave[:].profiles_2d[:].grid.rho_tor
  waves.coherent_wave[:].profiles_2d[:].electrons.power_density_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_2d[:].electrons.power_density_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_2d[:].n_tor ↔ _phi
  waves.coherent_wave[:].profiles_2d[:].power_density_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].state[:].power_density_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].state[:].power_density_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].state[:].power_inside_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].state[:].power_inside_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].power_density_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].power_density_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].power_inside_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].ion[:].power_inside_thermal_n_tor ↔ _phi
* waves.coherent_wave[:].profiles_1d[:].grid.rho_tor
  waves.coherent_wave[:].profiles_1d[:].electrons.power_density_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].electrons.power_density_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].electrons.power_inside_fast_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].electrons.power_inside_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].current_parallel_density_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].power_density_n_tor ↔ _phi
  waves.coherent_wave[:].profiles_1d[:].power_inside_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].ion[:].state[:].power_fast_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].ion[:].state[:].power_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].ion[:].power_fast_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].ion[:].power_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].electrons.power_fast_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].electrons.power_thermal_n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].current_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].n_tor ↔ _phi
  waves.coherent_wave[:].global_quantities[:].power_n_tor ↔ _phi
  waves.coherent_wave[:].beam_tracing[:].beam[:].wave_vector.k_tor ↔ _phi
  waves.coherent_wave[:].beam_tracing[:].beam[:].wave_vector.n_tor ↔ _phi
  waves.coherent_wave[:].beam_tracing[:].beam[:].wave_vector.varying_n_tor ↔ _phi
  wall.global_quantities.current_tor ↔ _phi
* transport_solver_numerics.solver_1d[:].grid.rho_tor
  transport_solver_numerics.derivatives_1d[:].ion[:].state[:].d_dt.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].ion[:].state[:].d_drho_tor_norm.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].ion[:].state[:].d2_drho_tor_norm2.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].ion[:].d_dt.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].ion[:].d_drho_tor_norm.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].ion[:].d2_drho_tor_norm2.velocity_tor ↔ _phi
* transport_solver_numerics.derivatives_1d[:].grid.rho_tor
  transport_solver_numerics.derivatives_1d[:].electrons.d_dt.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].electrons.d_drho_tor_norm.velocity_tor ↔ _phi
  transport_solver_numerics.derivatives_1d[:].electrons.d2_drho_tor_norm2.velocity_tor ↔ _phi
* transport_solver_numerics.derivatives_1d[:].dpsi_drho_tor
* summary.local.separatrix_average.position.rho_tor
* summary.local.separatrix.position.rho_tor
* summary.local.pedestal.position.rho_tor
* summary.local.magnetic_axis.position.rho_tor
* summary.local.itb.position.rho_tor
* spi.injector[:].pellet.velocity_tor
* spi.injector[:].fragment[:].velocity_tor
* spi.injector[:].velocity_mass_centre_fragments_tor
* spectrometer_visible.channel[:].polarization_spectroscopy.e_field_lh_tor
* sawteeth.profiles_1d[:].grid.rho_tor
* sawteeth.profiles_1d[:].j_tor
* sawteeth.profiles_1d[:].momentum_tor
* runaway_electrons.profiles_1d[:].grid.rho_tor
  runaway_electrons.global_quantities.current_tor ↔ _phi
* runaway_electrons.distribution.markers[:].orbit_integrals.n_tor
* radiation.process[:].profiles_1d[:].grid.rho_tor
* plasma_transport.model[:].profiles_1d[:].grid_v.rho_tor
* plasma_transport.model[:].profiles_1d[:].grid_flux.rho_tor
* plasma_transport.model[:].profiles_1d[:].grid_d.rho_tor
* plasma_sources.source[:].profiles_1d[:].grid.rho_tor
  plasma_sources.source[:].profiles_1d[:].momentum_tor ↔ _phi
  plasma_sources.source[:].global_quantities[:].torque_tor ↔ _phi
* plasma_profiles.profiles_2d[:].ion[:].state[:].rotation_frequency_tor
* plasma_profiles.profiles_2d[:].ion[:].rotation_frequency_tor
* plasma_profiles.profiles_1d[:].ion[:].state[:].rotation_frequency_tor
* plasma_profiles.profiles_1d[:].ion[:].rotation_frequency_tor
* plasma_profiles.profiles_1d[:].grid.rho_tor
* plasma_profiles.global_quantities.beta_tor
  plasma_initiation.profiles_2d[:].e_field_tor ↔ _phi
  ntms.time_slice[:].mode[:].onset.n_tor ↔ _phi
  ntms.time_slice[:].mode[:].detailed_evolution.n_tor ↔ _phi
* ntms.time_slice[:].mode[:].detailed_evolution.rho_tor
  ntms.time_slice[:].mode[:].n_tor ↔ _phi
* ntms.time_slice[:].mode[:].rho_tor
  mhd_linear.time_slice[:].toroidal_mode[:].n_tor ↔ _phi
* lh_antennas.antenna[:].row[:].n_tor
  ic_antennas.antenna[:].surface_current[:].n_tor ↔ _phi
  ic_antennas.antenna[:].module[:].strap[:].width_tor ↔ _phi
  gyrokinetics_local.normalizing_quantities.b_field_tor ↔ _phi
  ferritic.object[:].time_slice[:].b_field_tor ↔ _phi
  ferritic.object[:].time_slice[:].magnetic_moment_tor ↔ _phi
  equilibrium.time_slice[:].profiles_2d[:].b_field_tor ↔ _phi
  equilibrium.time_slice[:].profiles_2d[:].j_tor ↔ _phi
* equilibrium.time_slice[:].profiles_1d.darea_drho_tor
* equilibrium.time_slice[:].profiles_1d.dpsi_drho_tor
* equilibrium.time_slice[:].profiles_1d.dvolume_drho_tor
  equilibrium.time_slice[:].profiles_1d.j_tor ↔ _phi
* equilibrium.time_slice[:].profiles_1d.rho_tor
  equilibrium.time_slice[:].global_quantities.magnetic_axis.b_field_tor ↔ _phi
* equilibrium.time_slice[:].global_quantities.beta_tor
* edge_profiles.profiles_1d[:].ion[:].state[:].rotation_frequency_tor
* edge_profiles.profiles_1d[:].ion[:].rotation_frequency_tor
* edge_profiles.profiles_1d[:].grid.rho_tor
  edge_profiles.profiles_1d[:].j_tor ↔ _phi
  edge_profiles.profiles_1d[:].momentum_tor ↔ _phi
  ece.channel[:].beam_tracing[:].beam[:].wave_vector.k_tor ↔ _phi
  ece.channel[:].beam_tracing[:].beam[:].wave_vector.n_tor ↔ _phi
  ece.channel[:].beam_tracing[:].beam[:].wave_vector.varying_n_tor ↔ _phi
* ec_launchers.beam[:].steering_angle_tor
  distributions.distribution[:].profiles_2d[:].trapped.collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].trapped.current_tor ↔ _phi
* distributions.distribution[:].profiles_2d[:].grid.rho_tor
  distributions.distribution[:].profiles_2d[:].counter_passing.collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].counter_passing.current_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].co_passing.current_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_2d[:].current_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.source[:].momentum_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].trapped.current_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].thermalisation.momentum_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].source[:].momentum_tor ↔ _phi
* distributions.distribution[:].profiles_1d[:].grid.rho_tor
  distributions.distribution[:].profiles_1d[:].counter_passing.source[:].momentum_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].counter_passing.current_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.source[:].momentum_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].co_passing.current_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].current_fast_tor ↔ _phi
  distributions.distribution[:].profiles_1d[:].current_tor ↔ _phi
* distributions.distribution[:].markers[:].orbit_integrals.n_tor
  distributions.distribution[:].global_quantities[:].source[:].torque_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].collisions.ion[:].state[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].collisions.ion[:].state[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].collisions.ion[:].torque_fast_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].collisions.ion[:].torque_thermal_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].collisions.electrons.torque_fast_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].collisions.electrons.torque_thermal_tor ↔ _phi
  distributions.distribution[:].global_quantities[:].current_tor ↔ _phi
* distribution_sources.source[:].profiles_1d[:].grid.rho_tor
  distribution_sources.source[:].profiles_1d[:].momentum_tor ↔ _phi
* distribution_sources.source[:].markers[:].orbit_integrals.n_tor
  distribution_sources.source[:].global_quantities[:].shinethrough.torque_tor ↔ _phi
  distribution_sources.source[:].global_quantities[:].torque_tor ↔ _phi
* disruption.profiles_1d[:].grid.rho_tor
  disruption.global_quantities.current_halo_tor ↔ _phi
* core_transport.model[:].profiles_1d[:].grid_v.rho_tor
* core_transport.model[:].profiles_1d[:].grid_flux.rho_tor
* core_transport.model[:].profiles_1d[:].grid_d.rho_tor
* core_sources.source[:].profiles_1d[:].grid.rho_tor
  core_sources.source[:].profiles_1d[:].momentum_tor ↔ _phi
  core_sources.source[:].global_quantities[:].torque_tor ↔ _phi
* core_profiles.profiles_2d[:].ion[:].state[:].rotation_frequency_tor
* core_profiles.profiles_2d[:].ion[:].rotation_frequency_tor
  core_profiles.profiles_2d[:].momentum_tor ↔ _phi
* core_profiles.profiles_1d[:].ion[:].state[:].rotation_frequency_tor
* core_profiles.profiles_1d[:].ion[:].rotation_frequency_tor
* core_profiles.profiles_1d[:].grid.rho_tor
  core_profiles.profiles_1d[:].j_tor ↔ _phi
  core_profiles.profiles_1d[:].momentum_tor ↔ _phi
* core_profiles.global_quantities.beta_tor
* core_instant_changes.change[:].profiles_1d[:].ion[:].state[:].rotation_frequency_tor
* core_instant_changes.change[:].profiles_1d[:].ion[:].rotation_frequency_tor
* core_instant_changes.change[:].profiles_1d[:].grid.rho_tor
  core_instant_changes.change[:].profiles_1d[:].j_tor ↔ _phi
  core_instant_changes.change[:].profiles_1d[:].momentum_tor ↔ _phi
  b_field_non_axisymmetric.time_slice[:].field_map.b_field_tor ↔ _phi
  b_field_non_axisymmetric.time_slice[:].control_surface[:].b_field_tor ↔ _phi
* b_field_non_axisymmetric.time_slice[:].control_surface[:].n_tor

orso82 avatar Jan 07 '25 06:01 orso82

Agreed, most _tor variables are marked as obsolescent in this release to encourage the migration to _phi names. The _tor variables are removed in IMAS 4.0 so my understanding is that 3.42 is meant to be a stepping stone. It makes sense for OMAS to follow this approach as well, assuming it will ever transition to IMAS 4.0.

The machine mappings in OMAS should be updated to use the _phi naming convention with the move to 3.42. Do you see this as a requirement before allowing 3.42 in OMAS @orso82?

I don't know why some _tor names are retained, other than rho_tor being a special case that is recognized. I opened this Jira issue to see if there is a more official criteria https://jira.iter.org/projects/IMAS/issues/IMAS-5677

torrinba avatar Jan 07 '25 17:01 torrinba

This PR has not seen any activity in the past 60 days. It is now marked as stale and will be closed in 7 days if no further activity is registered.

github-actions[bot] avatar Mar 09 '25 01:03 github-actions[bot]

This PR has not seen any activity in the past 60 days. It is now marked as stale and will be closed in 7 days if no further activity is registered.

github-actions[bot] avatar May 09 '25 02:05 github-actions[bot]