MyST-NB
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executablebooks
0.16.0: pytest is failing in four units
Describe the bug
context I'm packaging your module as an rpm package so I'm using the typical PEP517 based build, install and test cycle used on building packages from non-root account.
-
python3 -sBm build -w --no-isolation - because I'm calling
buildwith--no-isolationI'm using during all processes only locally installed modules - install .whl file in </install/prefix>
- run pytest with PYTHONPATH pointing to sitearch and sitelib inside </install/prefix>
expectation pytest should not fail.
Reproduce the bug
N/A
List your environment
List of modules installed in build env
Package Version
----------------------------- -----------------
alabaster 0.7.12
anyio 3.6.1
appdirs 1.4.4
argon2-cffi 21.1.0
asttokens 2.0.5
attrs 22.1.0
Babel 2.10.2
backcall 0.2.0
beautifulsoup4 4.10.0
bleach 5.0.0
Brlapi 0.8.3
build 0.8.0
certifi 2021.10.8
cffi 1.15.1
charset-normalizer 2.1.0
click 8.1.2
coconut 1.6.0
codespell 2.1.0
colorama 0.4.4
coverage 6.4.2
cPyparsing 2.4.7.1.1.0
cssselect 1.1.0
cycler 0.11.0
debugpy 1.6.2
decorator 5.1.1
defusedxml 0.7.1
distro 1.7.0
docutils 0.18.1
entrypoints 0.4
executing 0.8.3
extended-project 1.2.3
extras 1.0.0
fastjsonschema 2.16.1
fixtures 4.0.0
flit_core 3.7.1
fonttools 4.34.4
gitdb 4.0.9
GitPython 3.1.27
gpg 1.17.1-unknown
greenlet 1.1.2
html5lib 1.1
idna 3.3
imagesize 1.4.1
importlib-metadata 4.12.0
importlib-resources 5.9.0
iniconfig 1.1.1
ipykernel 6.15.1
ipython 8.4.0
ipython-genutils 0.2.0
ipywidgets 7.7.0
jedi 0.18.1
Jinja2 3.1.1
jsonschema 4.8.0
jupyter-cache 0.5.0
jupyter_client 7.3.4
jupyter_core 4.11.1
jupyter-server 1.18.1
jupyter-server-mathjax 0.2.5
jupyter-sphinx 0.4.0
jupyterlab-pygments 0.1.2
jupytext 1.14.1
kiwisolver 1.4.4
libcomps 0.1.18
louis 3.22.0
lxml 4.9.1
markdown-it-py 2.1.0
MarkupSafe 2.1.1
matplotlib 3.5.2
matplotlib-inline 0.1.3
mdit-py-plugins 0.3.0
mdurl 0.1.1
mistune 2.0.3
mpmath 1.2.1
myst-parser 0.18.0
nbclient 0.6.6
nbconvert 6.5.0
nbdime 3.1.1
nbformat 5.4.0
nest-asyncio 1.5.5
notebook 6.4.12
numpy 1.23.1
olefile 0.46
packaging 21.3
pandas 1.4.2
pandocfilters 1.5.0
parso 0.8.3
pbr 5.8.1
pep517 0.12.0
pexpect 4.8.0
pickleshare 0.7.5
Pillow 9.2.0
pip 22.0.4
pluggy 1.0.0
ply 3.11
prometheus-client 0.14.1
prompt-toolkit 3.0.29
psutil 5.9.0
ptyprocess 0.7.0
pure-eval 0.2.2
py 1.11.0
pycparser 2.21
pydata-sphinx-theme 0.9.0
pyee 9.0.4
Pygments 2.12.0
PyGObject 3.42.2
pyparsing 3.0.9
pyppeteer 1.0.1
pyrsistent 0.18.1
pytest 7.1.2
pytest-cov 3.0.0
pytest-datadir 1.3.1
pytest-dependency 0.5.1
pytest_param_files 0.3.4
pytest-regressions 2.3.1
python-dateutil 2.8.2
pytz 2022.1
PyYAML 6.0
pyzmq 23.2.0
requests 2.28.1
rpm 4.17.0
scour 0.38.2
Send2Trash 1.8.0
setuptools 63.2.0
simple-project 1.2.3
six 1.16.0
smmap 5.0.0
sniffio 1.2.0
snowballstemmer 2.2.0
soupsieve 2.3.2.post1
Sphinx 5.1.1
sphinx-book-theme 0.3.3
sphinx-copybutton 0.5.0
sphinx_design 0.2.0
sphinx-rtd-theme 1.0.0
sphinx-togglebutton 0.3.2
sphinxcontrib-applehelp 1.0.2.dev20220714
sphinxcontrib-devhelp 1.0.2.dev20220714
sphinxcontrib_github_alt 1.2
sphinxcontrib-htmlhelp 2.0.0
sphinxcontrib-jsmath 1.0.1.dev20220712
sphinxcontrib-qthelp 1.0.3.dev20220712
sphinxcontrib-serializinghtml 1.1.5
SQLAlchemy 1.4.39.dev0
stack-data 0.3.0
sympy 1.10.1
tabulate 0.8.9
terminado 0.15.0
testpath 0.6.0
testtools 2.5.0
tinycss2 1.1.1
toml 0.10.2
tomli 2.0.1
tornado 6.1
tqdm 4.64.0
traitlets 5.3.0
typing_extensions 4.2.0
urllib3 1.26.9
wcwidth 0.2.5
webencodings 0.5.1
websocket-client 1.3.2
websockets 10.3
wheel 0.37.1
widgetsnbextension 3.6.0
zipp 3.8.1
List of modules installed in build env
Package Version
----------------------------- -----------------
alabaster 0.7.12
anyio 3.6.1
appdirs 1.4.4
argon2-cffi 21.1.0
asttokens 2.0.5
attrs 22.1.0
Babel 2.10.2
backcall 0.2.0
beautifulsoup4 4.10.0
bleach 5.0.0
Brlapi 0.8.3
build 0.8.0
certifi 2021.10.8
cffi 1.15.1
charset-normalizer 2.1.0
click 8.1.2
coconut 1.6.0
codespell 2.1.0
colorama 0.4.4
coverage 6.4.2
cPyparsing 2.4.7.1.1.0
cssselect 1.1.0
cycler 0.11.0
debugpy 1.6.2
decorator 5.1.1
defusedxml 0.7.1
distro 1.7.0
docutils 0.18.1
entrypoints 0.4
executing 0.8.3
extended-project 1.2.3
extras 1.0.0
fastjsonschema 2.16.1
fixtures 4.0.0
flit_core 3.7.1
fonttools 4.34.4
gitdb 4.0.9
GitPython 3.1.27
gpg 1.17.1-unknown
greenlet 1.1.2
html5lib 1.1
idna 3.3
imagesize 1.4.1
importlib-metadata 4.12.0
importlib-resources 5.9.0
iniconfig 1.1.1
ipykernel 6.15.1
ipython 8.4.0
ipython-genutils 0.2.0
ipywidgets 7.7.0
jedi 0.18.1
Jinja2 3.1.1
jsonschema 4.8.0
jupyter-cache 0.5.0
jupyter_client 7.3.4
jupyter_core 4.11.1
jupyter-server 1.18.1
jupyter-server-mathjax 0.2.5
jupyter-sphinx 0.4.0
jupyterlab-pygments 0.1.2
jupytext 1.14.1
kiwisolver 1.4.4
libcomps 0.1.18
louis 3.22.0
lxml 4.9.1
markdown-it-py 2.1.0
MarkupSafe 2.1.1
matplotlib 3.5.2
matplotlib-inline 0.1.3
mdit-py-plugins 0.3.0
mdurl 0.1.1
mistune 2.0.3
mpmath 1.2.1
myst-parser 0.18.0
nbclient 0.6.6
nbconvert 6.5.0
nbdime 3.1.1
nbformat 5.4.0
nest-asyncio 1.5.5
notebook 6.4.12
numpy 1.23.1
olefile 0.46
packaging 21.3
pandas 1.4.2
pandocfilters 1.5.0
parso 0.8.3
pbr 5.8.1
pep517 0.12.0
pexpect 4.8.0
pickleshare 0.7.5
Pillow 9.2.0
pip 22.0.4
pluggy 1.0.0
ply 3.11
prometheus-client 0.14.1
prompt-toolkit 3.0.29
psutil 5.9.0
ptyprocess 0.7.0
pure-eval 0.2.2
py 1.11.0
pycparser 2.21
pydata-sphinx-theme 0.9.0
pyee 9.0.4
Pygments 2.12.0
PyGObject 3.42.2
pyparsing 3.0.9
pyppeteer 1.0.1
pyrsistent 0.18.1
pytest 7.1.2
pytest-cov 3.0.0
pytest-datadir 1.3.1
pytest-dependency 0.5.1
pytest_param_files 0.3.4
pytest-regressions 2.3.1
python-dateutil 2.8.2
pytz 2022.1
PyYAML 6.0
pyzmq 23.2.0
requests 2.28.1
rpm 4.17.0
scour 0.38.2
Send2Trash 1.8.0
setuptools 63.2.0
simple-project 1.2.3
six 1.16.0
smmap 5.0.0
sniffio 1.2.0
snowballstemmer 2.2.0
soupsieve 2.3.2.post1
Sphinx 5.1.1
sphinx-book-theme 0.3.3
sphinx-copybutton 0.5.0
sphinx_design 0.2.0
sphinx-rtd-theme 1.0.0
sphinx-togglebutton 0.3.2
sphinxcontrib-applehelp 1.0.2.dev20220714
sphinxcontrib-devhelp 1.0.2.dev20220714
sphinxcontrib_github_alt 1.2
sphinxcontrib-htmlhelp 2.0.0
sphinxcontrib-jsmath 1.0.1.dev20220712
sphinxcontrib-qthelp 1.0.3.dev20220712
sphinxcontrib-serializinghtml 1.1.5
SQLAlchemy 1.4.39.dev0
stack-data 0.3.0
sympy 1.10.1
tabulate 0.8.9
terminado 0.15.0
testpath 0.6.0
testtools 2.5.0
tinycss2 1.1.1
toml 0.10.2
tomli 2.0.1
tornado 6.1
tqdm 4.64.0
traitlets 5.3.0
typing_extensions 4.2.0
urllib3 1.26.9
wcwidth 0.2.5
webencodings 0.5.1
websocket-client 1.3.2
websockets 10.3
wheel 0.37.1
widgetsnbextension 3.6.0
zipp 3.8.1
myst-nb has to be properly installed, to register entry points
myst-nb has been install;ed in </install/prefix> by unpacking generated .whl archive.
Something is wrong with that whl? 🤔