gotree
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Gotree is a set of command line tools and an API to manipulate phylogenetic trees. It is implemented in Go language.
dear, I have successfully managed to apply gotree to a set of >200 bacterial genomes. However, the results I have obtained are incongruent to those I obtained with a multiple-locus...
Hello - I've noticed when writing trees to file with `gotree draw svg` and `gotree draw png` tip labels get cut off. I think, for SVG at least, this is...
``` cat foo.nwk ((A:0.1,B:0.1),C:0.1); gotree collapse length -l 0.2 < foo.nwk ((A:0.1,B:0.1),C:0.1); ``` I was expecting to see `(A:0,B:0,C:0)` ?
Love this tool! Noticed some tools handle quoites labels in .nwk But other tools don't Be good to be able to convert between them Quoted: `('label1':0.231, ...);` Unquoted: (label1:0.231, ...);`...
Hi, My question is not really aboat gotree, just want to know do you have any idea to deal with those negative distance branches on NJ tree? Replace all negative...
When drawing radial (-r) svg images from newick trees labels get placed too close to tips and get rotated strangely. I guess it looks kind of OK with the fixed...