ettorefedele

Heterozygous SNP sites calling

3

Hello, I am currently using the mpileup | bcftools call pipeline to call multiple SNPs in diploid organisms. If I understood this correctly, the call command exploits the genotype likelihoods...

Hello, I am trying to estimate heterozygosity (and relative p values) per locus across all individuals within a population using SNP data. I have used the summary() function but that...