env yaml missing tabulate

[matteoguarrera]

[matteoguarrera]

we should use the same requirements between yaml and requirements.txt I noticed also that jax 0.4.20 raise some deprecation error. So I would suggest to push everything to jax 0.4.26. BTW I am also using NERSC

[joglekara]

yeah, agreed... I just use requirements.txt and a venv on NERSC to avoid conda issues on jobs. I think we can just source requirements.txt into the yaml file. Can you implement that? maybe 2 different reqs, one for gpu and one for cpu?

[matteoguarrera]

I actually create a conda environment using yaml on NERSC, so actually there is no need to keep requirements.txt. You can just conda env create -f env.yml or conda env create -f env_gpu.yml .
Or are you suggesting doing something like this?

name: my_environment
channels:
  - conda-forge
dependencies:
  - python=3.8
  - pip
  - pip:
      -r requirements_cpu.txt  # Replace with requirements_gpu.txt for GPU

[joglekara]

yeah I mean the latter bc I still use reqs.txt :P

But also because it is compatible with both workflows while the conda yaml doesn't support venv.