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build failure ‘tbb_allocator’ is not a member of ‘tbb’

Open smoe opened this issue 5 years ago • 8 comments

Hello, I keep running into

/bin/bash ./libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I.  -I./include -DBOOST_TEST_DYN_LINK -DBOOST_TEST_MAIN -pthread -I/usr/include -I/usr/lib/arb/INCLUDE -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include    -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG  -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -c -o src/align.lo src/align.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I./include -DBOOST_TEST_DYN_LINK -DBOOST_TEST_MAIN -pthread -I/usr/include -I/usr/lib/arb/INCLUDE -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2 -DNDEBUG -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -c src/align.cpp  -fPIC -DPIC -o src/.libs/align.o
src/align.cpp: In function ‘void sina::do_align(sina::cseq&, const cseq&, MASTER&, transition&, std::ostream&)’:
src/align.cpp:484:55: error: ‘tbb_allocator’ is not a member of ‘tbb’
  484 |     using mesh_t = mesh<MASTER, cseq, data_type, tbb::tbb_allocator<data_type>>;
      |                                                       ^~~~~~~~~~~~~
src/align.cpp:484:55: error: ‘tbb_allocator’ is not a member of ‘tbb’
src/align.cpp:484:69: error: template argument 4 is invalid
  484 |     using mesh_t = mesh<MASTER, cseq, data_type, tbb::tbb_allocator<data_type>>;
      |                                                                     ^~~~~~~~~
src/align.cpp:485:59: error: ‘mesh_t’ has not been declared
  485 |     logger->debug("Allocating {}MB for alignment matrix", mesh_t::guessMem(m, c)/1024/1024);
      |                                                           ^~~~~~
src/align.cpp:486:5: error: ‘mesh_t’ was not declared in this scope
  486 |     mesh_t A(m, c);
      |     ^~~~~~
src/align.cpp:491:13: error: ‘A’ was not declared in this scope
  491 |     compute(A, cns);
      |             ^
make[2]: *** [Makefile:1300: src/align.lo] Error 1

Any idea?

g++ (Debian 10.2.1-1) 10.2.1 20201207
libtbb-dev:amd64 2020.3-1
boost 1.71.0

on Debian unstable. I saw the problem also reported in June on https://www.mail-archive.com/[email protected]/msg117530.html.

Many thanks!

smoe avatar Dec 09 '20 00:12 smoe

The configuration is

dh_auto_configure -- --with-arbhome=/usr/lib/arb \
  --with-tbb=no --with-tbb-malloc=no --disable-static \
   --with-gnu-ld
        ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-arbhome=/usr/lib/arb --with-tbb=no --with-tbb-malloc=no --disable-static --with-gnu-ld
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
...

smoe avatar Dec 09 '20 00:12 smoe

Sounds like a change in tbb. The allocator isn't defined and things go haywire after that.

epruesse avatar Dec 09 '20 07:12 epruesse

Ok, not a change. I think this is because you used "--with-tbb-malloc=no", which should turn off the use off tbb::tbb_allocator<> but doesn't.

epruesse avatar Dec 11 '20 17:12 epruesse

This should be fixed as of 14a17e997945311798c779ca07b3c674fcf97432 and published in 1.7.2

epruesse avatar Dec 13 '20 20:12 epruesse

@smoe Please try this again. I could not reproduce fully. There also will be some performance impact to not using TBB malloc for many threads.

epruesse avatar Dec 13 '20 20:12 epruesse

Thank you for your swift action. I had always tried different compiler options, i.e. with and without tbb and tbb-malloc, which from what I recollect always led to the same error. And - good news - we are past that now.

When not passing any options to configure (besides disable static and arbhome) I see

/bin/bash ./libtool  --tag=CXX   --mode=link g++  -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -L/usr/lib/x86_64-linux-gnu -L/usr/lib/arb/lib -Wl,-rpath -Wl,/usr/lib/arb/lib   -Wl,-z,relro   -o src/sina src/sina.o src/libsina.la   -lARBDB -lCORE -lglib-2.0 -lboost_program_options -lboost_thread -lpthread -lboost_iostreams -lboost_system -lboost_filesystem -ltbb -ltbbmalloc -ldl -lrt 
libtool: link: g++ -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -Wl,-rpath -Wl,/usr/lib/arb/lib -Wl,-z -Wl,relro -o src/.libs/sina src/sina.o  -L/usr/lib/x86_64-linux-gnu -L/usr/lib/arb/lib src/.libs/libsina.so -lARBDB -lCORE -lglib-2.0 -lboost_program_options -lboost_thread -lpthread -lboost_iostreams -lboost_system -lboost_filesystem -ltbb -ltbbmalloc -ldl -lrt
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_create(aisc_com*, int, AISC_Object const&, int, int, AISC_Object&, ...)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `BI_helix::init(GBDATA*, char const*)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_get(aisc_com*, int, AISC_Object const&, ...)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_open(char const*, AISC_Object&, long, char const**)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_close(aisc_com*, AISC_Object&)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_put(aisc_com*, int, AISC_Object const&, ...)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `BI_helix::~BI_helix()'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `BI_helix::BI_helix()'
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:1167: src/sina] Error 1
make[2]: Leaving directory '/home/moeller/tmp/sina'
make[1]: *** [Makefile:986: all] Error 2
make[1]: Leaving directory '/home/moeller/tmp/sina'

This does not seem too surprising since

...
checking pkg-config is at least version 0.9.0... yes
checking for glib-2.0 > 2.2... yes
checking arbdb.h usability... yes
checking arbdb.h presence... yes
checking for arbdb.h... yes
checking for libARBDB location... /usr/lib/arb/lib
checking for GB_open in -lARBDB... yes
checking for ARB PROBE_COM... found
checking for aisc_open in ARB PROBE_COM... no
checking for ARB HELIX static lib... no
checking for GBT_FIND_SEQUENCE in libARBDB... no
checking arb_handlers.h usability... yes
checking arb_handlers.h presence... yes
checking for arb_handlers.h... yes
checking ARB status return type... bool
checking for boostlib >= 1.62 (106200)... yes
checking whether the Boost::Thread library is available... yes
checking for exit in -lboost_thread... yes
checking whether the Boost::Program_Options library is available... yes
checking for exit in -lboost_program_options... yes
checking whether the Boost::IOStreams library is available... yes
checking for exit in -lboost_iostreams... yes
...

and when I then add the same compiler flags that suggest not to use the tbb and tbb-malloc, I get a bunch of link errors which seem independent of the tbb-malloc setting (have not checked them all):

/usr/include/tbb/tbb.h:21:154: note: ‘#pragma message: TBB Warning: tbb.h contains deprecated functionality. For details, please see Deprecated Features appendix in the TBB reference manual.’
   21 | #pragma message("TBB Warning: tbb.h contains deprecated functionality. For details, please see Deprecated Features appendix in the TBB reference manual.")
      |                                                                                                                                                          ^
/bin/bash ./libtool  --tag=CXX   --mode=link g++  -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -L/usr/lib/arb/lib -Wl,-rpath -Wl,/usr/lib/arb/lib -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o src/libsina.la -rpath /usr/lib/x86_64-linux-gnu src/align.lo src/aligned_base.lo src/alignment_stats.lo src/cseq.lo src/cseq_comparator.lo src/famfinder.lo src/mseq.lo src/pseq.lo src/query_arb.lo src/query_pt.lo src/rw_fasta.lo src/rw_arb.lo src/rw_csv.lo src/log.lo src/search.lo src/search_filter.lo src/tray.lo src/kmer_search.lo -lz -lARBDB -lCORE -lglib-2.0 -lboost_program_options -lboost_thread -lpthread -lboost_iostreams -lboost_system -lboost_filesystem   -ldl -lrt 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/10/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/10/crtbeginS.o  src/.libs/align.o src/.libs/aligned_base.o src/.libs/alignment_stats.o src/.libs/cseq.o src/.libs/cseq_comparator.o src/.libs/famfinder.o src/.libs/mseq.o src/.libs/pseq.o src/.libs/query_arb.o src/.libs/query_pt.o src/.libs/rw_fasta.o src/.libs/rw_arb.o src/.libs/rw_csv.o src/.libs/log.o src/.libs/search.o src/.libs/search_filter.o src/.libs/tray.o src/.libs/kmer_search.o   -L/usr/lib/arb/lib -L/usr/lib/x86_64-linux-gnu -lz -lARBDB -lCORE -lglib-2.0 -lboost_program_options -lboost_thread -lpthread -lboost_iostreams -lboost_system -lboost_filesystem -ldl -lrt -L/usr/lib/gcc/x86_64-linux-gnu/10 -L/usr/lib/gcc/x86_64-linux-gnu/10/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/10/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/10/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/10/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/10/../../../x86_64-linux-gnu/crtn.o  -g -O2 -fstack-protector-strong -g -O2 -fstack-protector-strong -Wl,-rpath -Wl,/usr/lib/arb/lib -Wl,-z -Wl,relro   -Wl,-soname -Wl,libsina.so.0 -o src/.libs/libsina.so.0.0.0
libtool: link: (cd "src/.libs" && rm -f "libsina.so.0" && ln -s "libsina.so.0.0.0" "libsina.so.0")
libtool: link: (cd "src/.libs" && rm -f "libsina.so" && ln -s "libsina.so.0.0.0" "libsina.so")
libtool: link: ( cd "src/.libs" && rm -f "libsina.la" && ln -s "../libsina.la" "libsina.la" )
/bin/bash ./libtool  --tag=CXX   --mode=link g++  -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -L/usr/lib/x86_64-linux-gnu -L/usr/lib/arb/lib -Wl,-rpath -Wl,/usr/lib/arb/lib   -Wl,-z,relro -o src/sina src/sina.o src/libsina.la   -lARBDB -lCORE -lglib-2.0 -lboost_program_options -lboost_thread -lpthread -lboost_iostreams -lboost_system -lboost_filesystem   -ldl -lrt 
libtool: link: g++ -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/home/moeller/tmp/sina=. -fstack-protector-strong -Wformat -Werror=format-security -W -Wno-deprecated-copy -Wl,-rpath -Wl,/usr/lib/arb/lib -Wl,-z -Wl,relro -o src/.libs/sina src/sina.o  -L/usr/lib/x86_64-linux-gnu -L/usr/lib/arb/lib src/.libs/libsina.so -lARBDB -lCORE -lglib-2.0 -lboost_program_options -lboost_thread -lpthread -lboost_iostreams -lboost_system -lboost_filesystem -ldl -lrt
/usr/bin/ld: src/sina.o: in function `void tbb::interface7::task_arena::execute_impl<void, tbb::flow::interface10::graph::spawn_functor>(tbb::flow::interface10::graph::spawn_functor&)':
/usr/include/tbb/task_arena.h:271: undefined reference to `tbb::interface7::internal::task_arena_base::internal_execute(tbb::interface7::internal::delegate_base&) const'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_continuation_proxy const&)':
/usr/include/tbb/task.h:1163: undefined reference to `tbb::internal::allocate_continuation_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::internal::throw_exception(tbb::internal::exception_id)':
/usr/include/tbb/tbb_exception.h:105: undefined reference to `tbb::internal::throw_exception_v4(tbb::internal::exception_id)'
/usr/bin/ld: src/sina.o: in function `tbb::interface7::task_arena::initialize()':
/usr/include/tbb/task_arena.h:317: undefined reference to `tbb::interface7::internal::task_arena_base::internal_initialize()'
/usr/bin/ld: src/sina.o: in function `get_options_description(boost::program_options::options_description&, boost::program_options::options_description&)':
./src/sina.cpp:228: undefined reference to `tbb::task_scheduler_init::default_num_threads()'
/usr/bin/ld: src/sina.o: in function `tbb::task_scheduler_init::task_scheduler_init(int, unsigned long)':
/usr/include/tbb/task_scheduler_init.h:136: undefined reference to `tbb::task_scheduler_init::initialize(int, unsigned long)'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `void tbb::interface7::task_arena::execute_impl<void, tbb::flow::interface10::graph::wait_functor const>(tbb::flow::interface10::graph::wait_functor const&)':
/usr/include/tbb/task_arena.h:271: undefined reference to `tbb::interface7::internal::task_arena_base::internal_execute(tbb::interface7::internal::delegate_base&) const'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::wait_for_all()':
/usr/include/tbb/internal/_flow_graph_impl.h:347: undefined reference to `tbb::task_group_context::is_group_execution_cancelled() const'
/usr/bin/ld: src/sina.o: in function `tbb::task_scheduler_init::~task_scheduler_init()':
/usr/include/tbb/task_scheduler_init.h:142: undefined reference to `tbb::task_scheduler_init::terminate()'
/usr/bin/ld: src/sina.o: in function `tbb::interface7::task_arena::initialize()':
/usr/include/tbb/task_arena.h:317: undefined reference to `tbb::interface7::internal::task_arena_base::internal_initialize()'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::wait_for_all()':
/usr/include/tbb/internal/_flow_graph_impl.h:364: undefined reference to `tbb::task_group_context::reset()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::task_scheduler_init::~task_scheduler_init()':
/usr/include/tbb/task_scheduler_init.h:142: undefined reference to `tbb::task_scheduler_init::terminate()'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::wait_for_all()':
/usr/include/tbb/internal/_flow_graph_impl.h:353: undefined reference to `tbb::task_group_context::reset()'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::limiter_node<sina::tray, tbb::flow::interface11::continue_msg>::remove_successor(tbb::flow::interface11::internal::untyped_receiver&)':
sina.cpp:(.text._ZN3tbb4flow11interface1112limiter_nodeIN4sina4trayENS1_12continue_msgEE16remove_successorERNS1_8internal16untyped_receiverE[_ZN3tbb4flow11interface1112limiter_nodeIN4sina4trayENS1_12continue_msgEE16remove_successorERNS1_8internal16untyped_receiverE]+0x28): undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `void tbb::interface7::task_arena::execute_impl<void, tbb::flow::interface10::graph::wait_functor const>(tbb::flow::interface10::graph::wait_functor const&)':
/usr/include/tbb/task_arena.h:271: undefined reference to `tbb::interface7::internal::task_arena_base::internal_execute(tbb::interface7::internal::delegate_base&) const'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::wait_for_all()':
/usr/include/tbb/internal/_flow_graph_impl.h:347: undefined reference to `tbb::task_group_context::is_group_execution_cancelled() const'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::~graph()':
/usr/include/tbb/flow_graph.h:801: undefined reference to `tbb::interface5::internal::task_base::destroy(tbb::task&)'
/usr/bin/ld: /usr/include/tbb/flow_graph.h:802: undefined reference to `tbb::task_group_context::~task_group_context()'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::graph_task*>::deallocate(tbb::flow::interface11::graph_task**, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `tbb::interface7::task_arena::terminate()':
/usr/include/tbb/task_arena.h:361: undefined reference to `tbb::interface7::internal::task_arena_base::internal_terminate()'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::wait_for_all()':
/usr/include/tbb/internal/_flow_graph_impl.h:364: undefined reference to `tbb::task_group_context::reset()'
/usr/bin/ld: src/sina.o: in function `tbb::interface7::task_arena::initialize()':
/usr/include/tbb/task_arena.h:317: undefined reference to `tbb::interface7::internal::task_arena_base::internal_initialize()'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface10::graph::wait_for_all()':
/usr/include/tbb/internal/_flow_graph_impl.h:353: undefined reference to `tbb::task_group_context::reset()'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: /usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::source_node<sina::tray>::remove_successor(tbb::flow::interface11::internal::untyped_receiver&)':
/usr/include/tbb/flow_graph.h:1258: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: /usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o:/usr/include/tbb/spin_rw_mutex.h:110: more undefined references to `tbb::spin_rw_mutex_v3::internal_acquire_writer()' follow
/usr/bin/ld: src/sina.o: in function `tbb::interface7::task_arena::task_arena(tbb::interface7::task_arena::attach)':
/usr/include/tbb/task_arena.h:310: undefined reference to `tbb::interface7::internal::task_arena_base::internal_attach()'
/usr/bin/ld: src/sina.o: in function `tbb::task_group_context::task_group_context(tbb::internal::string_index)':
/usr/include/tbb/task.h:519: undefined reference to `tbb::task_group_context::init()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_root_with_context_proxy const&)':
/usr/include/tbb/task.h:1154: undefined reference to `tbb::internal::allocate_root_with_context_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::interface7::task_arena::initialize()':
/usr/include/tbb/task_arena.h:317: undefined reference to `tbb::interface7::internal::task_arena_base::internal_initialize()'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::graph_task*>::deallocate(tbb::flow::interface11::graph_task**, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::deallocate(tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul>*, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::buffer_node<sina::tray, tbb::flow::interface11::null_type>::~buffer_node()':
/usr/include/tbb/flow_graph.h:893: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::buffer_node<sina::tray, tbb::flow::interface11::null_type>::~buffer_node()':
/usr/include/tbb/flow_graph.h:893: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::queue_node<sina::tray, tbb::flow::interface11::null_type>::~queue_node()':
sina.cpp:(.text._ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED2Ev[_ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED5Ev]+0xf0): undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o:sina.cpp:(.text._ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED2Ev[_ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED5Ev]+0x210): more undefined references to `tbb::internal::NFS_Free(void*)' follow
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::deallocate(tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul>*, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o:/usr/include/tbb/flow_graph.h:893: more undefined references to `tbb::internal::NFS_Free(void*)' follow
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::deallocate(tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul>*, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::function_node<sina::tray, sina::tray, tbb::flow::interface11::internal::graph_policy_namespace::queueing, tbb::flow::interface11::null_type>::~function_node()':
/usr/include/tbb/flow_graph.h:1456: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::function_node<sina::tray, sina::tray, tbb::flow::interface11::internal::graph_policy_namespace::queueing, tbb::flow::interface11::null_type>::~function_node()':
/usr/include/tbb/flow_graph.h:1456: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::queue_node<sina::tray, tbb::flow::interface11::null_type>::~queue_node()':
sina.cpp:(.text._ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED0Ev[_ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED5Ev]+0xd0): undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::queue_node<sina::tray, tbb::flow::interface11::null_type>::~queue_node()':
sina.cpp:(.text._ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED0Ev[_ZN3tbb4flow11interface1110queue_nodeIN4sina4trayENS1_9null_typeEED5Ev]+0x1d0): undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o:/usr/include/tbb/cache_aligned_allocator.h:87: more undefined references to `tbb::internal::NFS_Free(void*)' follow
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::allocate(unsigned long, void const*)':
/usr/include/tbb/cache_aligned_allocator.h:82: undefined reference to `tbb::internal::NFS_Allocate(unsigned long, unsigned long, void*)'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::deallocate(tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul>*, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::allocate(unsigned long, void const*)':
/usr/include/tbb/cache_aligned_allocator.h:82: undefined reference to `tbb::internal::NFS_Allocate(unsigned long, unsigned long, void*)'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul> >::deallocate(tbb::flow::interface11::internal::type_plus_align<sina::tray, tbb::flow::interface11::internal::item_buffer<sina::tray, tbb::cache_aligned_allocator<sina::tray> >::buffer_item_state, 4ul>*, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::graph_task*>::deallocate(tbb::flow::interface11::graph_task**, unsigned long)':
/usr/include/tbb/cache_aligned_allocator.h:87: undefined reference to `tbb::internal::NFS_Free(void*)'
/usr/bin/ld: src/sina.o:/usr/include/tbb/cache_aligned_allocator.h:87: more undefined references to `tbb::internal::NFS_Free(void*)' follow
/usr/bin/ld: src/sina.o: in function `tbb::cache_aligned_allocator<tbb::flow::interface11::graph_task*>::allocate(unsigned long, void const*)':
/usr/include/tbb/cache_aligned_allocator.h:82: undefined reference to `tbb::internal::NFS_Allocate(unsigned long, unsigned long, void*)'
/usr/bin/ld: /usr/include/tbb/cache_aligned_allocator.h:82: undefined reference to `tbb::internal::NFS_Allocate(unsigned long, unsigned long, void*)'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: /usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::source_node<sina::tray>::register_successor(tbb::flow::interface11::internal::untyped_receiver&)':
/usr/include/tbb/flow_graph.h:1249: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: /usr/include/tbb/flow_graph.h:1249: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::source_node<sina::tray>::try_release()':
/usr/include/tbb/flow_graph.h:1324: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: /usr/include/tbb/flow_graph.h:1324: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::source_node<sina::tray>::try_consume()':
/usr/include/tbb/flow_graph.h:1334: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: /usr/include/tbb/flow_graph.h:1334: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `non-virtual thunk to tbb::flow::interface11::source_node<sina::tray>::try_get(sina::tray&)':
/usr/include/tbb/flow_graph.h:1290: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::flow::interface11::internal::priority_task_selector::execute()':
/usr/include/tbb/internal/_flow_graph_impl.h:197: undefined reference to `tbb::interface5::internal::task_base::destroy(tbb::task&)'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: /usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: /usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:111: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_reader()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator delete(void*, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: /usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator delete(void*, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: src/sina.o: in function `tbb::spin_rw_mutex_v3::scoped_lock::acquire(tbb::spin_rw_mutex_v3&, bool)':
/usr/include/tbb/spin_rw_mutex.h:110: undefined reference to `tbb::spin_rw_mutex_v3::internal_acquire_writer()'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator delete(void*, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator delete(void*, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: /usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: /usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator delete(void*, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: src/sina.o: in function `operator new(unsigned long, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1179: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/sina.o: in function `operator delete(void*, tbb::internal::allocate_additional_child_of_proxy const&)':
/usr/include/tbb/task.h:1183: undefined reference to `tbb::internal::allocate_additional_child_of_proxy::free(tbb::task&) const'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal19forward_task_bypassINS1_12limiter_nodeIN4sina4trayENS1_12continue_msgEEEEE[_ZTVN3tbb4flow11interface118internal19forward_task_bypassINS1_12limiter_nodeIN4sina4trayENS1_12continue_msgEEEEE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal19forward_task_bypassINS1_11buffer_nodeIN4sina4trayENS1_9null_typeEEEEE[_ZTVN3tbb4flow11interface118internal19forward_task_bypassINS1_11buffer_nodeIN4sina4trayENS1_9null_typeEEEEE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal22apply_body_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_NS1_12continue_msgES8_SA_EEEES6_EE[_ZTVN3tbb4flow11interface118internal22apply_body_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_NS1_12continue_msgES8_SA_EEEES6_EE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal22apply_body_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_S6_S8_SA_EEEES6_EE[_ZTVN3tbb4flow11interface118internal22apply_body_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_S6_S8_SA_EEEES6_EE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal19forward_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_NS1_12continue_msgES8_SA_EEEEEE[_ZTVN3tbb4flow11interface118internal19forward_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_NS1_12continue_msgES8_SA_EEEEEE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal19forward_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_S6_S8_SA_EEEEEE[_ZTVN3tbb4flow11interface118internal19forward_task_bypassINS2_19function_input_baseIN4sina4trayENS2_22graph_policy_namespace8queueingENS_23cache_aligned_allocatorIS6_EENS2_14function_inputIS6_S6_S8_SA_EEEEEE]+0x28): more undefined references to `tbb::task::note_affinity(unsigned short)' follow
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTIN3tbb10empty_taskE[_ZTIN3tbb10empty_taskE]+0x10): undefined reference to `typeinfo for tbb::task'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTIN3tbb4flow11interface1110graph_taskE[_ZTIN3tbb4flow11interface1110graph_taskE]+0x10): undefined reference to `typeinfo for tbb::task'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTIN3tbb4flow11interface118internal22priority_task_selectorE[_ZTIN3tbb4flow11interface118internal22priority_task_selectorE]+0x10): undefined reference to `typeinfo for tbb::task'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb10empty_taskE[_ZTVN3tbb10empty_taskE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal22priority_task_selectorE[_ZTVN3tbb4flow11interface118internal22priority_task_selectorE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/sina.o:(.data.rel.ro._ZTVN3tbb4flow11interface118internal18source_task_bypassINS1_11source_nodeIN4sina4trayEEEEE[_ZTVN3tbb4flow11interface118internal18source_task_bypassINS1_11source_nodeIN4sina4trayEEEEE]+0x28): undefined reference to `tbb::task::note_affinity(unsigned short)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `tbb::internal::get_initial_auto_partitioner_divisor()'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_create(aisc_com*, int, AISC_Object const&, int, int, AISC_Object&, ...)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `BI_helix::init(GBDATA*, char const*)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `tbb::internal::allocate_child_proxy::allocate(unsigned long) const'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_get(aisc_com*, int, AISC_Object const&, ...)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `tbb::internal::allocate_via_handler_v3(unsigned long)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_open(char const*, AISC_Object&, long, char const**)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `tbb::internal::allocate_root_with_context_proxy::free(tbb::task&) const'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_close(aisc_com*, AISC_Object&)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `aisc_put(aisc_com*, int, AISC_Object const&, ...)'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `BI_helix::~BI_helix()'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `BI_helix::BI_helix()'
/usr/bin/ld: src/.libs/libsina.so: undefined reference to `tbb::internal::deallocate_via_handler_v3(void*)'
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:1167: src/sina] Error 1
make[2]: Leaving directory '/home/moeller/tmp/sina'
make[1]: *** [Makefile:986: all] Error 2
make[1]: Leaving directory '/home/moeller/tmp/sina'
dh_auto_build: error: make -j2 returned exit code 2
make: *** [debian/rules:12: binary] Error 2

So, my immediate fix would be to use the tbb (had only set the "no" in a hope to avoid that initial build error) and start investigating what is causing the non-tbb link errors. Suggestions welcome :)

I can find a machine for you to log in to and reproduce the error any time if that is of any help.

Many thanks and kind regards! Steffen

smoe avatar Dec 13 '20 23:12 smoe

A machine to reproduce would indeed help!

If you could copy https://github.com/epruesse.keys to .../.ssh/authorized_keys (+chmod 600) and give me user/ip, I'll try to look into this.

epruesse avatar Dec 15 '20 00:12 epruesse

./configure should really error out if there is no ARBDB - it won't work without.

I'm guessing that there is some -l missing that is needed on your system.

I can probably try this in a Debian docker, actually. Just need to find the time to track the problem.

epruesse avatar Dec 15 '20 00:12 epruesse