TESK

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Mount PVC with reference data to executor

7

Allow a PVC on which reference data is saved, to be mounted on the executor pod for easy/fast data access.

uniqueg

Containers are run as root

3

The current implementation runs all containers as root. This is not necessary and a security concern. Re-factor to run containers as non-privileged users instead.

uniqueg

In some circunstances, like when the memory requirement is too high, TESK will never fail. Non transient errors returned by k8s should make the task to fail. Reported by @lvarin

uniqueg

Extend documentation with additional examples

1

Provide tutorials and examples for using TESK with cwl-tes, Snakemake and Nextflow clients.

uniqueg

Try to refresh expired tokens

1

Tokens passed by a client may expire during the lifetime of a task, even if they are valid when the original request is received. This may prevent TESK from being...

uniqueg

Set job TTL or implement garbage collector

3

Hey, I am running long workflows which produce a lot of tasks and each task has 4 jobs generating more than 300 jobs/pods which have pvs/pvcs attached to them until...

ghost

Are there anybody use locally input file to calculate by TESK and how to configuration?

7

Are there anybody use locally input file to calculate by TESK and how to configuration? Anybody can help me?

pengchunhua

How to clean up failed jobs and pods

1

Hello, We have seen an issue in TESK, we put the wrong tag for an image in a workflow, and now the pod that has to execute is in "ImagePullBackOff"....

lvarin

Hi, in k8s, privileges are not managed in the same way as in openshift and if a pod needs to access files on PV, additional setup to containers needs to...

xhejtman

Configuration of PVC storageClass

3

Hey, I am new to TESK and testing to run some workflows in a k8s cluster which uses rook-ceph object storage which I would like to use for the task...

ghost