Deep-Proteomics

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Word vector dimension

2

Hi, after downloading your latest model "uniref_embeddings", I found that the dimensionality of the protein word vector is not 100 dimensions, it is greater than 900 dimensions, so. Has the...

Gravity9874

Any plans to release the ProtVecX embeddings? Thanks!

rhyschappell

Missing vectors

2

Why the vectors for 3grams: 'HDU', 'USC', 'XLC', 'GUS', 'UKK', 'XNM', 'TGU', 'UAR', 'KBF', 'CUI', 'UGS', 'WXV', 'WCU', 'DUA', 'FXQ', 'SCU', 'XTC', 'URS', 'WRX', 'VWX', 'XGH', 'SSU', 'DKB' are missing?...

peter-volkov

Plan to release this?

2

I'm guessing that this is the source code that accompanies "Continuous Distributed Representation of Biological Sequences for Deep Proteomics and Genomics." Is there any plan to release it? I am...

audy