ePSIC-DLS
Create boundary_analysis.py
This is a standalone script to perform particle boundary analysis such as boundary curvature and find boundary pixels in clockwise sequence.
Tom I am not sure how do you want to integrate this into ParticleSpy. One of your opened issue you mentioned could make particlespy to allow plug-in additions. This script can also be implemented to scikit-image in the future I think.
Codecov Report
Merging #52 into master will decrease coverage by
12.08%. The diff coverage is0.00%.
@@ Coverage Diff @@
## master #52 +/- ##
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- Coverage 81.48% 69.39% -12.09%
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Files 13 14 +1
Lines 821 964 +143
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Hits 669 669
- Misses 152 295 +143
| Impacted Files | Coverage Δ | |
|---|---|---|
| ParticleSpy/boundary_analysis.py | 0.00% <0.00%> (ø) |
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I think this would be good to leave as a utility function that can be run on individual particles. i.e. it isn't run when doing ParticleAnalysis. It would be good to have a function that could be run on one Particle and one that could be run on a Particle_list.
What do you think the output for a user should be? Maybe a min, max and average curvature to be added to particle properties? Plus the option to plot the curvature of particles(s) when running the analysis?
I think this would be good to leave as a utility function that can be run on individual particles. i.e. it isn't run when doing ParticleAnalysis. It would be good to have a function that could be run on one Particle and one that could be run on a Particle_list.
What do you think the output for a user should be? Maybe a min, max and average curvature to be added to particle properties? Plus the option to plot the curvature of particles(s) when running the analysis?
Yes I agree to all above you suggested.