particlespy
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Add a function to show segmented particle images/masks as montage
Plus some .pyc cache files and parameter.h5 file were manually chosen to be ignored because they cannot be ignored automatically on my PC.
Codecov Report
Merging #51 into master will decrease coverage by
2.66%. The diff coverage is12.90%.
@@ Coverage Diff @@
## master #51 +/- ##
==========================================
- Coverage 80.99% 78.32% -2.67%
==========================================
Files 13 13
Lines 784 812 +28
==========================================
+ Hits 635 636 +1
- Misses 149 176 +27
| Impacted Files | Coverage Δ | |
|---|---|---|
| ParticleSpy/ptcl_class.py | 65.51% <6.89%> (-11.73%) |
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| ParticleSpy/ParticleAnalysis.py | 93.92% <100.00%> (-0.03%) |
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This has broken things for me. The first particle has an image stored correctly but all others just have zeros.
I'm not sure I follow all of your changes in terms of the background subtraction and the boxing/padding. Are you sure this is all correct?