repeatR

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read_rm error using str_trim

2

Hi, I am trying to open my repeatmasker output file using read_rm as in the tutorial but I keep getting this error: Error in `str_trim()`: ! `side` must be one...

frieljames

Fixes `read_rm()` broken call to `str_trim()`.

cgroza

getting error in summarise_rm_ID

7

hello Sir, I was analyzing repeat masker output for Oryza_sativa_HR12, was faced the following error, please suggest a solution. Should I share RMasker output file? > Oryza_sativa_HR12_aggregated

Ravindra-Raut

eg, report total coverage of a query/chromosome by all TEs, each class etc. Can likely re-use some of @KelliSmith17 summary/aggregation code here

dwinter

Sure would be nice

dwinter