David Winter comments

Results 32 comments of


                                            David Winter

HTTP failure: 500

Hi @SuzeMa , 500 is an error code for an error that happened on the server side. It's possible this was an intermittent problem ok the NCBI's side. If it...

API rate limiting for concurrent processes

Thanks @epruesse, last time I looked at this NCBI did not send the rate limit headers so we were a bit stuck on how to deal with multiple processes/multithreading. Will...

Suggest: full URL in error message

Thanks @richelbilderbeek Good idea, and I think it should be do-able. Just a note, this is my last work-week for 2020 and I'll be taking a proper break over the...

Error in r[["strand"]] : subscript out of bounds

Hi Danielle, Glad this package has helped you! It's a bit hard to debug this without an example, but my best guess is that the chromosome names you are giving...

How to find which coordinates are repeating in target chromosomes

Hi @khush876 , Sorry for the delay in responding to this. I have recently started a new position, so been a bit hectic finishing up one job and startng the...

dotplot order by tstart

Hi @ruolin. A very good idea, thanks. Will mark it for the next release!

set size of sequence labels in dotplot()

Hi @fraca, in the current version of the package this is not actually possible (there are so many things that could be tweaked, we tried not to overload the number...

getting error in summarise_rm_ID

Hi @Ravindra-Raut , Thanks for filing this issue. Just dropping you a note to say it's come at a very busy time, so it will be a little while until...

create function to check that the taxa listed by tnrs_match_names are in the TOL

Oh, seems I stumbled on this independently (OpenTreeOfLife/opentree#777)

create function to check that the taxa listed by tnrs_match_names are in the TOL

Sounds like a good idea -- and happily I can use the work I'm doing now, including the workaround, as the example.