`gather_results` is no longer exported
The function gather_results is still referenced in the docs by functions such as plot_all_cell_types but is not exported anymore (since 19fb2d4). Hence, gather_results is neither available in the spacexr namespace, nor in the Roxygen docs.
For a user, a workaround is to use gather_results via the ::: operator (access of not exported functions). Please clarify if there's a replacement that should be used instead or if this is unintended.
Hello,
We will change the documentation to not reference the gather_results function publicly. You typically should not need this function. Please let me know your use case. For plotting, the function create_RCTD_plots and its corresponding code should show how to use the plotting functions.
Best, Dylan
Hello,
I wanted to follow-up on this. Without the post-processing pipeline for the prior version of RCTD, what code can be used to get the decomposed data?