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`gather_results` is no longer exported

Open ppm1337 opened this issue 2 years ago • 2 comments

The function gather_results is still referenced in the docs by functions such as plot_all_cell_types but is not exported anymore (since 19fb2d4). Hence, gather_results is neither available in the spacexr namespace, nor in the Roxygen docs.

For a user, a workaround is to use gather_results via the ::: operator (access of not exported functions). Please clarify if there's a replacement that should be used instead or if this is unintended.

ppm1337 avatar Dec 14 '23 10:12 ppm1337

Hello,

We will change the documentation to not reference the gather_results function publicly. You typically should not need this function. Please let me know your use case. For plotting, the function create_RCTD_plots and its corresponding code should show how to use the plotting functions.

Best, Dylan

dmcable avatar Jan 09 '24 20:01 dmcable

Hello,

I wanted to follow-up on this. Without the post-processing pipeline for the prior version of RCTD, what code can be used to get the decomposed data?

dblevenson avatar Feb 17 '25 21:02 dblevenson