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About calculating RPM (reads per million) using bamCoverage.

Open DontCareYaYa opened this issue 2 years ago • 1 comments

How can I use bamCoverage to calculate RPM? deeptools version is 3.5.1. Thanks!

DontCareYaYa avatar Jun 19 '23 12:06 DontCareYaYa

Hiya,

--normalizeUsing CPM should do what you need.

Kind regards,

WardDeb

WardDeb avatar Aug 22 '23 12:08 WardDeb