Isolating Clusters From Heatmap Created With DeepTools

Open kherzberger opened this issue 3 years ago • 2 comments

I successfully created a heatmap using deeptools that contains k means clustering. How would I now isolate the data from those individual clusters?

Jul 19 '22 19:07 kherzberger

you could use --outFileSortedRegions to get the regions or --outFileNameMatrix to have the full matrix

Jul 20 '22 09:07 LeilyR

you could use --outFileSortedRegions to get the regions or --outFileNameMatrix to have the full matrix

That worked great! Thanks.

Jul 20 '22 17:07 kherzberger