Not able to change xRange and yRange from plotCorrelation

[iramai]

Hy!! I have been trying to use plotCorrelation function but I am not able to adjust de x and y axis. This is the code I am using:

multiBamSummary bins --bamfiles R1C_1_val_1_bismark_bt2_pe.deduplicated_sorted.bam R2C_1_val_1_bismark_bt2_pe.deduplicated_sorted.bam -o RC_bismark_deduplicated_bins.npz --outRawCounts RC_bismark_deduplicated_rawcounts.tab --ignoreDuplicates --minMappingQuality 30

plotCorrelation -in RT_bismark_deduplicated_bins.npz --corMethod pearson --labels rep1 rep2 --xRange 0 100 --yRange 0 100 --whatToPlot scatterplot -o scatterplot_PearsonCorr_bamscores_RT.png

It doesn't matter if I change the --xRange and --yRange values, but the scatterplot.png always looks the same. Maybe I need some () or [] or , ; when specifing the values??

Thanks in advance,

Iraia

[iramai]

Hi!! please could you help me?

[flyingicedragon]

You can check suggestions in this issue. #946

[dgoekbuget]

Also not working for me.

[leotiwei]

I meet the same problem and solved it now. Maybe you can try to download an old 3.1.2 version deeptools in a new conda environment, it's works for me.

[dgoekbuget]

True, that version works.