Sample data for testing
Welcome to deepTools GitHub repository! Before opening the issue please check that the following requirements are met :
-
[x ] Search whether this issue (or a similar issue) has been solved before using the search tab above. Link the previous issue if appropriate below.
-
[x ] Paste your deepTools version (
deeptools --version) and your python version (python --version) below. deep tools 3.5.0 python 2.7 -
[ ] Paste the full deepTools command that produces the issue below (ignore if you simply spotted the issue in the code/documentation).
-
[ ] Paste the output printed on screen from the command that produces the issue below (ignore if you simply spotted the issue in the code/documentation).
Hi, Thank you for offering the software package to scientific community. I would like to test my installation with sample data using default commands. especially the matrix file for plotHeatmap. Could you tell me where I can download the detailed commands and corresponding sample data please?
You might be able to run nosetests --with-doctest -sv deeptools, presuming you have nose installed. That's done as part of our automated testing and generates some plots that you won't see and tests them for integrity. Otherwise there's really no need to test your installation.