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A Python Package to Automate Thermodynamic Integration Calculations for Free Energy

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updates: - [github.com/pre-commit/pre-commit-hooks: v4.5.0 → v4.6.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.5.0...v4.6.0) - [github.com/astral-sh/ruff-pre-commit: v0.1.8 → v0.4.4](https://github.com/astral-sh/ruff-pre-commit/compare/v0.1.8...v0.4.4)

Bumps [actions/checkout](https://github.com/actions/checkout) from 2 to 4. Release notes Sourced from actions/checkout's releases. v4.0.0 What's Changed Update default runtime to node20 by @​takost in actions/checkout#1436 Support fetching without the --progress option...

dependencies

Bumps [actions/setup-python](https://github.com/actions/setup-python) from 2 to 5. Release notes Sourced from actions/setup-python's releases. v5.0.0 What's Changed In scope of this release, we update node version runtime from node16 to node20 (actions/setup-python#772)....

dependencies

Dear Developers, Here are two questions on Gibbs free energy of liquid water based on the paper (Phase Diagram of a Deep Potential Water Model). Firstly, I noticed that a...

xref: https://github.com/deepmodeling/dpgen/issues/1462

Dear developers, Here comes a demand to conduct TI with temperature/pressure-dependent constrains. The scenario is to obtain the temperature-dependent Free energy difference as [ΔG = G2-(G0+G1)] vs T, where sys2...

Current behavior: 1) json files controlling MD inputs is requested to have default names, and only one working json is permitted for each step of the workflow 2) dpti would...

i begin to use dpti and it seems to work but questions below confuse me: 1)There is no _FreeEnergyLiquid.json_, can not open. And i don't find it in dpti pakages....

After installation with `python setup.py install`, performed in the git cloned latest master branch, the command `airflow -h` raises the following error ```python import httpx File "/opt/anaconda3/lib/python3.8/site-packages/httpx-0.19.0-py3.8.egg/httpx/__init__.py", line 2, in...

Airflow use SequentialExecutor by default. However SequentialExecutor does not support postgresql, so it could be better to mentioned this when user decide to use postgresql instead of sqlite. https://airflow.apache.org/docs/apache-airflow/stable/executor/sequential.html