NeSVoR
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daviddmc
NeSVoR is a package for GPU-accelerated slice-to-volume reconstruction.
Using "nesvor segment-stack" standalone command (https://nesvor.readthedocs.io/en/latest/commands/segment-stack.html) generates masks with different sform/qform and origin, which, in turn, makes the "nesvor reconstruct" fail with the error: ``` 2024-03-13 15:55:26 [INFO] Data loading...
Dear @daviddmc, Thank you for this open source code! I try to reproduce your experiments by computing the PSNR score between the reconstructed volume from NeSVoR and the original high...
**TypeError: 'ABCMeta' object is not subscriptable** torch 1.10.0+cu113 cuda 11.2 python 3.8.10 nesvor reconstruct --input-slices ../nesvor/casenii \ --output-slices ../nesvor/outnii \ --output-resolution 0.8 \ --registration svort \ --segmentation \ --bias-field-correction seems...
Thank you for your fantastic work! I've successfully run your open-source code for 3D reconstruction. However, after the reconstruction of the fetal brain, there are always some regions that are...
Possibly naive suggestion, I wonder if we can lower VRAM usage and/or improve speed using https://github.com/microsoft/DeepSpeed ?
Hi NeSVoR team, Thank you so much for making the code public! I tried to reproduce your results using the CRL atlas dataset. But found that I need to enter...
Hello! I was wanting to use your NeSVoR tookit to reconstruct some misaligned 2D slices of liver MRI I was working on, but I'm running into some issues regarding usage....
Greetings. Hello, I wonder how can I sample some slice other than the three basic planes, i.e. coronal、sagittal、transverse plane. For example, a tilted-45-degree coronal plane. Many thanks for your time...
